Detailed information of g1037.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_019647497.1, PREDICTED: protocadherin Fat 4-like [Branchiostoma belcheri]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
Q9NYQ8Protocadherin Fat 2 OS=Homo sapiens OX=9606 GN=FAT2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF01921tRNA-synt_1ftRNA synthetases class I (K)FamilyInterproscan
PF08246Inhibitor_I29Cathepsin propeptide inhibitor domain (I29)DomainInterproscan
PF00112Peptidase_C1Papain family cysteine proteaseDomainInterproscan
PF03385STELLOSTELLO glycosyltransferasesFamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF12698ABC2_membrane_3ABC-2 family transporter proteinFamilyInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF10230LIDHydrolaseLipid-droplet associated hydrolaseFamilyInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00100Zona_pellucidaZona pellucida-like domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR039808FamilyCadherinInterproscan
IPR002904FamilyLysine-tRNA ligaseInterproscan
IPR008925Homologous_superfamilyAminoacyl-tRNA synthetase, class I, anticodon-binding superfamilyInterproscan
IPR020751Homologous_superfamilyAminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2Interproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR013201DomainCathepsin propeptide inhibitor domain (I29)Interproscan
IPR013128FamilyPeptidase C1AInterproscan
IPR039417DomainPapain-like cysteine endopeptidaseInterproscan
IPR000668DomainPeptidase C1A, papain C-terminalInterproscan
IPR025660Active_siteCysteine peptidase, histidine active siteInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR000169Active_siteCysteine peptidase, cysteine active siteInterproscan
IPR025661Active_siteCysteine peptidase, asparagine active siteInterproscan
IPR005049FamilySTELLO-likeInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR026082FamilyABC transporter AInterproscan
IPR013525DomainABC-2 type transporter, transmembrane domainInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR019363FamilyLipid droplet-associated hydrolaseInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR042235Homologous_superfamilyZona pellucida, ZP-C domainInterproscan
IPR048290DomainZona pellucida domain, chordate-typeInterproscan
IPR001507DomainZona pellucida domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24027CADHERIN-23Interproscan
PTHR37940LYSINE--TRNA LIGASEInterproscan
PTHR12411CYSTEINE PROTEASE FAMILY C1-RELATEDInterproscan
PTHR31362GLYCOSYLTRANSFERASE STELLO1-RELATEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR19229ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCAInterproscan
PTHR13390LIPASEInterproscan
PTHR45695LEUCOKININ RECEPTOR-RELATEDInterproscan
PTHR14002ENDOGLIN/TGF-BETA RECEPTOR TYPE IIIInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0000902Biological Processcell morphogenesisInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0007043Biological Processcell-cell junction assemblyInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016339Biological Processcalcium-dependent cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0034332Biological Processadherens junction organizationInterproscan
GO:0044331Biological Processcell-cell adhesion mediated by cadherinInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004824Molecular Functionlysine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006430Biological Processlysyl-tRNA aminoacylationInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0004197Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0006869Biological Processlipid transportInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005811Cellular Componentlipid dropletInterproscan
GO:0016298Molecular Functionlipase activityInterproscan
GO:0019915Biological Processlipid storageInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05643ABCA3; ATP-binding cassette, subfamily A (ABC1), member 3-Glycosylphosphatidylinositol (GPI)-anchored proteinsko00537deepkoala
Transportersko02000deepkoala

TOP