Detailed information of g1038.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_050565034.1, succinate--hydroxymethylglutarate CoA-transferase isoform X8 [Cygnus atratus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TNE1Succinyl-CoA:glutarate CoA-transferase OS=Mus musculus OX=10090 GN=Sugct PE=1 SV=2
Q68FU4Succinyl-CoA:glutarate CoA-transferase OS=Rattus norvegicus OX=10116 GN=Sugct PE=2 SV=1
Q9HAC7Succinyl-CoA:glutarate CoA-transferase OS=Homo sapiens OX=9606 GN=SUGCT PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03357Snf7Snf7FamilyInterproscan
PF16543DFRP_CDRG Family Regulatory Proteins, Tma46DomainInterproscan
PF01842ACTACT domainDomainInterproscan
PF00351Biopterin_HBiopterin-dependent aromatic amino acid hydroxylaseDomainInterproscan
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF00764Arginosuc_synthArginosuccinate synthase N-terminal HUP domainDomainInterproscan
PF20979Arginosuc_syn_CArginosuccinate synthase C-terminal domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF02515CoA_transf_3CoA-transferase family IIIFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005024FamilySnf7 familyInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR032378DomainZC3H15/TMA46 family, C-terminalInterproscan
IPR019774DomainAromatic amino acid hydroxylase, C-terminalInterproscan
IPR002912DomainACT domainInterproscan
IPR036329Homologous_superfamilyAromatic amino acid monoxygenase, C-terminal domain superfamilyInterproscan
IPR045865Homologous_superfamilyACT-like domainInterproscan
IPR001273FamilyAromatic amino acid hydroxylaseInterproscan
IPR036951Homologous_superfamilyAromatic amino acid hydroxylase superfamilyInterproscan
IPR002350DomainKazal domainInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR050653FamilyProtease Inhibitors and Growth Factor AntagonistsInterproscan
IPR018223Conserved_siteArgininosuccinate synthase, conserved siteInterproscan
IPR001518FamilyArgininosuccinate synthaseInterproscan
IPR024074Homologous_superfamilyArgininosuccinate synthetase, catalytic/multimerisation domain bodyInterproscan
IPR023434FamilyArgininosuccinate synthase, type 1 subfamilyInterproscan
IPR048267DomainArginosuccinate synthase-like, N-terminal domainInterproscan
IPR048268DomainArginosuccinate synthase C-terminal domainInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR051485FamilySR-related and CTD-associated factorInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR003673FamilyCoA-transferase family IIIInterproscan
IPR050483FamilyCoA-transferase III domain-containing proteinInterproscan
IPR023606Homologous_superfamilyCoA-transferase family III domain 1 superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22761CHARGED MULTIVESICULAR BODY PROTEINInterproscan
PTHR12681ZINC FINGER-CONTAINING PROTEIN P48ZNFInterproscan
PTHR11473AROMATIC AMINO ACID HYDROXYLASEInterproscan
PTHR10913FOLLISTATIN-RELATEDInterproscan
PTHR11587ARGININOSUCCINATE SYNTHASEInterproscan
PTHR23140RNA PROCESSING PROTEIN LD23810PInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR48207SUCCINATE--HYDROXYMETHYLGLUTARATE COA-TRANSFERASEInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007034Biological Processvacuolar transportInterproscan
GO:0005771Cellular Componentmultivesicular bodyInterproscan
GO:0006900Biological Processvesicle budding from membraneInterproscan
GO:0032511Biological Processlate endosome to vacuole transport via multivesicular body sorting pathwayInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0002181Biological Processcytoplasmic translationInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016714Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygenInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0009072Biological Processaromatic amino acid metabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0004055Molecular Functionargininosuccinate synthase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006526Biological ProcessL-arginine biosynthetic processInterproscan
GO:0000050Biological Processurea cycleInterproscan
GO:0000053Biological Processargininosuccinate metabolic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12198CHMP5, VPS60; charged multivesicular body protein 5-Exosomeko04147deepkoala
Membrane traffickingko04131deepkoala

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