Detailed information of g1039.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAJ7379344.1, Cyclin-D-binding Myb-like transcription factor 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6DG03Cyclin-D-binding Myb-like transcription factor 1 OS=Danio rerio OX=7955 GN=dmtf1 PE=2 SV=1
Q9Y222Cyclin-D-binding Myb-like transcription factor 1 OS=Homo sapiens OX=9606 GN=DMTF1 PE=1 SV=1
Q66HG1Cyclin-D-binding Myb-like transcription factor 1 OS=Rattus norvegicus OX=10116 GN=Dmtf1 PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyMYB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04774HABP4_PAI-RBP1Hyaluronan / mRNA binding familyFamilyInterproscan
PF00149MetallophosCalcineurin-like phosphoesteraseDomainInterproscan
PF00071RasRas familyDomainInterproscan
PF20500DNA-PKcs_NDNA-PKcs, N-terminalRepeatInterproscan
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF12832MFS_1_likeMFS_1 like familyFamilyInterproscan
PF07717OB_NTP_bindOligonucleotide/oligosaccharide-binding (OB)-foldDomainInterproscan
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan
PF00696AA_kinaseAmino acid kinase familyFamilyInterproscan
PF13840ACT_7ACT domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006861DomainHyaluronan/mRNA-binding proteinInterproscan
IPR039764FamilyRNA binding protein HABP4/SERBP1-likeInterproscan
IPR004843DomainCalcineurin-like phosphoesterase domain, ApaH typeInterproscan
IPR006186DomainSerine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphataseInterproscan
IPR047129FamilySerine/Threonine protein phosphatase PP2A-likeInterproscan
IPR029052Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan
IPR052768FamilyPre-mRNA_splicing_regulatory_proteinInterproscan
IPR050227FamilyRas-related protein RabInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR046804DomainDNA-PKcs, N-terminalInterproscan
IPR017930DomainMyb domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR051651FamilyDMTF1 DNA-binding transcriptional regulatorsInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR024989DomainMajor facilitator superfamily associated domainInterproscan
IPR051717FamilyMajor facilitator superfamily MFSD6Interproscan
IPR007502DomainHelicase-associated domainInterproscan
IPR011709DomainDEAD-box helicase, OB foldInterproscan
IPR001048DomainAspartate/glutamate/uridylate kinaseInterproscan
IPR036393Homologous_superfamilyAcetylglutamate kinase-like superfamilyInterproscan
IPR002912DomainACT domainInterproscan
IPR027795DomainCASTOR, ACT domainInterproscan
IPR001341FamilyAspartate kinaseInterproscan
IPR005260FamilyAspartate kinase, monofunctional classInterproscan
IPR018042Conserved_siteAspartate kinase, conserved siteInterproscan
IPR045865Homologous_superfamilyACT-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12299HYALURONIC ACID-BINDING PROTEIN 4Interproscan
PTHR45619SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATEDInterproscan
PTHR18806RBM25 PROTEINInterproscan
PTHR47977RAS-RELATED PROTEIN RABInterproscan
PTHR46380CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR40326PROTEIN CBG10816Interproscan
PTHR16172UNCHARACTERIZEDInterproscan
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan
PTHR21499ASPARTATE KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0000082Biological ProcessG1/S transition of mitotic cell cycleInterproscan
GO:0004722Molecular Functionprotein serine/threonine phosphatase activityInterproscan
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0002151Molecular FunctionG-quadruplex RNA bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0004072Molecular Functionaspartate kinase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0009089Biological Processlysine biosynthetic process via diaminopimelateInterproscan
GO:0009090Biological Processhomoserine biosynthetic processInterproscan
GO:0008652Biological Processamino acid biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15498PPP6C; serine/threonine-protein phosphatase 6 catalytic subunitEC:3.1.3.16
Monobactam biosynthesisko00261deepkoala
DNA repair and recombination proteinsko03400deepkoala

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