Detailed information of g104.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBT3226662.1, TRAP transporter large permease subunit [Deltaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9KQS1C4-dicarboxylate TRAP transporter large permease protein DctM OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=dctM PE=3 SV=1
Q9HU16C4-dicarboxylate TRAP transporter large permease protein DctM OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=dctM PE=1 SV=1
Q9Y3Q0N-acetylated-alpha-linked acidic dipeptidase 2 OS=Homo sapiens OX=9606 GN=NAALAD2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06808DctMTripartite ATP-independent periplasmic transporter, DctM componentFamilyInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF04253TFR_dimerTransferrin receptor-like dimerisation domainDomainInterproscan
PF02225PAPA domainFamilyInterproscan
PF04389Peptidase_M28Peptidase family M28FamilyInterproscan
PF06209COBRA1Cofactor of BRCA1 (COBRA1)FamilyInterproscan
PF01235Na_Ala_sympSodium:alanine symporter familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010656DomainTRAP C4-dicarboxylate transport system permease DctM subunitInterproscan
IPR004681FamilyTRAP transporter large membrane protein DctMInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR038459Homologous_superfamilytRNA methyltransferase TRM10-type domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR012020FamilyAB hydrolase 4 familyInterproscan
IPR050960FamilyAB hydrolase superfamily, subfamily 4Interproscan
IPR039373FamilyTransferrin receptor protein 1/Glutamate carboxypeptidase 2-likeInterproscan
IPR036757Homologous_superfamilyTransferrin receptor-like, dimerisation domain superfamilyInterproscan
IPR007365DomainTransferrin receptor-like, dimerisation domainInterproscan
IPR046450Homologous_superfamilyPA domain superfamilyInterproscan
IPR003137DomainPA domainInterproscan
IPR007484DomainPeptidase M28Interproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR001223DomainGlycoside hydrolase family 18, catalytic domainInterproscan
IPR010405FamilyCofactor of BRCA1Interproscan
IPR001463FamilySodium:alanine symporterInterproscan
IPR043533FamilyCyclic nucleotide-binding domain-containing protein 1/2Interproscan
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR018490Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan
IPR000595DomainCyclic nucleotide-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33362SIALIC ACID TRAP TRANSPORTER PERMEASE PROTEIN SIAT-RELATEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan
PTHR10794ABHYDROLASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10404N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASEInterproscan
PTHR16306TRANSLIN-ASSOCIATED FACTOR X-INTERACTING PROTEIN 1Interproscan
PTHR13503NEGATIVE ELONGATION FACTOR COMPLEX MEMBER BInterproscan
PTHR30330AGSS FAMILY TRANSPORTER, SODIUM-ALANINEInterproscan
PTHR23011UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0034338Molecular Functionshort-chain carboxylesterase activityInterproscan
GO:0044255Biological Processobsolete cellular lipid metabolic processInterproscan
GO:0047372Molecular Functionmonoacylglycerol lipase activityInterproscan
GO:0004180Molecular Functioncarboxypeptidase activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0032021Cellular ComponentNELF complexInterproscan
GO:0034244Biological Processnegative regulation of transcription elongation by RNA polymerase IIInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0005283Molecular Functionamino acid:sodium symporter activityInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0006865Biological Processamino acid transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03310TC.AGCS; alanine or glycine:cation symporter, AGCS family-Transport-deepkoala

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