Gene detail

Detailed information of g1040.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_030853824.1, uncharacterized protein K02A2.6-like [Strongylocentrotus purpuratus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8BH58	TIP41-like protein OS=Mus musculus OX=10090 GN=Tiprl PE=1 SV=1
A2VCX1	TIP41-like protein OS=Rattus norvegicus OX=10116 GN=Tiprl PE=1 SV=1
O75663	TIP41-like protein OS=Homo sapiens OX=9606 GN=TIPRL PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00169	PH	PH domain	Domain	Interproscan
PF09744	Jnk-SapK_ap_N	JNK_SAPK-associated protein-1	Family	Interproscan
PF16471	JIP_LZII	JNK-interacting protein leucine zipper II	Coiled-coil	Interproscan
PF03462	PCRF	PCRF domain	Domain	Interproscan
PF00472	RF-1	RF-1 domain	Family	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF04176	TIP41	TIP41-like family	Family	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004870	Family	Nucleoporin, Nup155-like	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR051707	Family	Phosphoinositide-Interacting Signal Transduction Regulators	Interproscan
IPR019143	Domain	JNK/Rab-associated protein-1, N-terminal	Interproscan
IPR034743	Domain	RH1 domain	Interproscan
IPR032486	Domain	JNK-interacting protein, leucine zipper II	Interproscan
IPR039911	Family	JNK-interacting protein 3/4	Interproscan
IPR004374	Family	Peptide chain release factor 2	Interproscan
IPR045853	Homologous_superfamily	Peptide chain release factor class I superfamily	Interproscan
IPR000352	Domain	Peptide chain release factor class I	Interproscan
IPR005139	Domain	Peptide chain release factor	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR051330	Family	Phosphatase regulators and Met sulfoxide reductases	Interproscan
IPR007303	Family	TIP41-like protein	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR050111	Family	C-type lectin and snaclec domain-containing protein	Interproscan
IPR018378	Conserved_site	C-type lectin, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10350	NUCLEAR PORE COMPLEX PROTEIN NUP155	Interproscan
PTHR14336	TANDEM PH DOMAIN CONTAINING PROTEIN	Interproscan
PTHR13886	JNK/SAPK-ASSOCIATED PROTEIN	Interproscan
PTHR43116	PEPTIDE CHAIN RELEASE FACTOR 2	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR21021	GAF/PUTATIVE CYTOSKELETAL PROTEIN	Interproscan
PTHR22803	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000972	Biological Process	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery	Interproscan
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0006405	Biological Process	RNA export from nucleus	Interproscan
GO:0006606	Biological Process	protein import into nucleus	Interproscan
GO:0006913	Biological Process	nucleocytoplasmic transport	Interproscan
GO:0017056	Molecular Function	structural constituent of nuclear pore	Interproscan
GO:0036228	Biological Process	protein localization to nuclear inner membrane	Interproscan
GO:0044611	Cellular Component	nuclear pore inner ring	Interproscan
GO:0005078	Molecular Function	MAP-kinase scaffold activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008432	Molecular Function	JUN kinase binding	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0019894	Molecular Function	kinesin binding	Interproscan
GO:0030159	Molecular Function	signaling receptor complex adaptor activity	Interproscan
GO:0006415	Biological Process	translational termination	Interproscan
GO:0016149	Molecular Function	translation release factor activity, codon specific	Interproscan
GO:0003747	Molecular Function	translation release factor activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0031929	Biological Process	TOR signaling	Interproscan
GO:0043666	Biological Process	obsolete regulation of phosphoprotein phosphatase activity	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22244	REG4; regenerating islet-derived protein 4	-	Protein phosphatases and associated proteins	ko01009	deepkoala
			Translation factors	ko03012	deepkoala
			Peptidases and inhibitors	ko01002	deepkoala