Detailed information of g10438.t1 in Montipora capitata

Genomic Location: Sc0000291:308277...346050
NR annotation: XP_044175290.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114961454 [Acropora millepora]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B8V7Q1Protocadherin-like protein OS=Acropora millepora OX=45264 PE=1 SV=1
O15943Neural-cadherin OS=Drosophila melanogaster OX=7227 GN=CadN PE=1 SV=2
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000983 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02210
all species →
Laminin_G_2Laminin G domainDomainInterproscan
PF00008
all species →
EGFEGF-like domainDomainInterproscan
PF00054
all species →
Laminin_G_1Laminin G domainDomainInterproscan
PF00028
all species →
CadherinCadherin domainDomainInterproscan
PF01049
all species →
CADH_Y-type_LIRCadherin, Y-type LIR-motifFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039808
all species →
FamilyCadherinInterproscan
IPR015919
all species →
Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126
all species →
DomainCadherin-likeInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR001791
all species →
DomainLaminin G domainInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR020894
all species →
Conserved_siteCadherin conserved siteInterproscan
IPR027397
all species →
Homologous_superfamilyCatenin binding domain superfamilyInterproscan
IPR001881
all species →
DomainEGF-like calcium-binding domainInterproscan
IPR000233
all species →
DomainCadherin, Y-type LIR-motifInterproscan
IPR000152
all species →
PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24027
all species →
CADHERIN-23Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000902
all species →
Biological Processcell morphogenesisInterproscan
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0005912
all species →
Cellular Componentadherens junctionInterproscan
GO:0007043
all species →
Biological Processcell-cell junction assemblyInterproscan
GO:0007275
all species →
Biological Processmulticellular organism developmentInterproscan
GO:0016339
all species →
Biological Processcalcium-dependent cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0016342
all species →
Cellular Componentcatenin complexInterproscan
GO:0034332
all species →
Biological Processadherens junction organizationInterproscan
GO:0044331
all species →
Biological Processcell-cell adhesion mediated by cadherinInterproscan
GO:0045296
all species →
Molecular Functioncadherin bindingInterproscan
GO:0098609
all species →
Biological Processcell-cell adhesionInterproscan
GO:0098742
all species →
Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0007156
all species →
Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007155
all species →
Biological Processcell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g10438.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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