Detailed information of g1048.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047143658.1, gamma-aminobutyric acid receptor subunit rho-3 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P22933Gamma-aminobutyric acid receptor subunit delta OS=Mus musculus OX=10090 GN=Gabrd PE=2 SV=1
P18506Gamma-aminobutyric acid receptor subunit delta OS=Rattus norvegicus OX=10116 GN=Gabrd PE=1 SV=2
O93430Glycine receptor subunit alphaZ1 OS=Danio rerio OX=7955 GN=glra1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12698ABC2_membrane_3ABC-2 family transporter proteinFamilyInterproscan
PF13304AAA_21AAA domain, putative AbiEii toxin, Type IV TA systemDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF03143GTP_EFTU_D3Elongation factor Tu C-terminal domainDomainInterproscan
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF07546EMIEMI domainDomainInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF13895Ig_2Immunoglobulin domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF00561Abhydrolase_1alpha/beta hydrolase foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026082FamilyABC transporter AInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013525DomainABC-2 type transporter, transmembrane domainInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR004160DomainTranslation elongation factor EFTu/EF1A, C-terminalInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR009001Homologous_superfamilyTranslation elongation factor EF1A/initiation factor IF2gamma, C-terminalInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR050100FamilyTranslation factor GTPase superfamily membersInterproscan
IPR011489DomainEMI domainInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR006028FamilyGamma-aminobutyric acid A receptor/Glycine receptor alphaInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR050266FamilyAB hydrolase superfamilyInterproscan
IPR000073DomainAlpha/beta hydrolase fold-1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19229ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCAInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR23115TRANSLATION FACTORInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR24543MULTICOPPER OXIDASE-RELATEDInterproscan
PTHR43798MONOACYLGLYCEROL LIPASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0006869Biological Processlipid transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003747Molecular Functiontranslation release factor activityInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0018444Cellular Componenttranslation release factor complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005254Molecular Functionchloride channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1902476Biological Processchloride transmembrane transportInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0046464Biological Processacylglycerol catabolic processInterproscan
GO:0047372Molecular Functionmonoacylglycerol lipase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03267ERF3, GSPT; peptide chain release factor subunit 3-Translation factorsko03012deepkoala

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