Gene detail

Detailed information of g10501.t1 in Montipora capitata

Genomic Location: Sc0000295:194615...208704
NR annotation: XP_029187202.2, centromere protein I-like [Acropora millepora]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g10501.t1

atggtcatgaccaatgattcatcaagctctgtcaaattggacgaatccattgattttttgctgaaacaagatttatctggtccaaaagctcggatcaaggtggaaactgcacttgcagttgaaatgattgaagacgtagctcataacaacggattacagcaagatcaagtggagaatttggtcaagctcgttaccagtgcaaaatatgctgatagtgtatcatctagacttgtaaagtgcctcattcctcaggggttagttccttcatcagctgttgtcaaagtggcttccaggatgtgcaccaacaaattgtctcttaatatgaaggttttgttggttcgatggatattaataatatttaacctaatcgatgacctgaaagatttgcattctttgtatggagtattttttcttttcttggaaagtaatatgttgtgtccccatatctgtcatctcctttattatctgaccagaaaagaggatgtgcagcacttcaggattaaaaagcttttagatctccaaagccgaatgggaatcaaaccacacttggttggcttaatttccatctacaagatacactgtccaaatcttgtaagtttggcatcatcatcttcaaataagaaactgtggtttaaggaatcagacatgtcttggagagaggcaatcaagaaagtccagactagatacaatgcaccaattttgctggacagcttcctcctttcagtgggagtaacatgcaagtctccattacccaagaaaaggaagttctgtcacagggtcagcattcctgaaatatataccactgccttgccagaaaagaagatttctagtgagcagccttcttctttcaaagatcttctcaacagtattgacattgttgagtttccaagtcaggttgcttgtgtcctcaactctcctctcttacaacatgcattgtcctgtaacccagagtttgttgtgcttcagagattaaacttctggctcaatcattctttgtgtgaagaattttttactggatcagaggcttatacagatgcaagcagcatgttactattgcagaaactggagaattttacatgttttattcaggagtctatacctgccttggaagcctttttggtgcagtacctgtttacatggaatggaaaagacttcagaccactgttactgaaactcattgctcagttaagcttatggccatttcaacgtttcaatgacttaatccttgaacacctcagaaaactttttttctcctcatcagtttacaccaagtgccaaataatgtactgttttaccagtttgttgagaaatttcttggctgttgagttaccaaggcaacaagaattacttcaggaggaaagatcaaacatagcatgtgtgtcgatgtttgttgaagatgaagtggcaccgtttgatcccctaaagactgtgtatgactttattcagtttgtggacaagatttgtgttgtaggactccaggtcgaagaagaccacgcccttttgcagcattgggttttgaattttttcgaattggtatcaactgcccatcggcagttctcccttccttttgtggagattccatcatcaggcatcatttacaggatgctgttttcagataactcaatggctgtctcaagattgtgtcaaatcgtcgtaaattacaagagggagttcgaatcgctcaaaacatcacaaggagattcacaggcgccttgcttggcatttccggatggatttcaaagcatacaaagattgaatcagtacattctggatatttgcgacagcctatggagaaacaaagctttcatcgataaagagaaatcgttttgtttcagtatgccaagctcagtgactgattctcttgctgtaaatcatatgaacgagttattttcaatccaccatcacgtggctttgattggggaggcctggaaattcctccatcagactcagcctgaagaaatgaaactcaccccgagcttgataaagggtcgttcaagacgagcctttttggagcatctgatgcaacgaaatattggtgggattctcactttcctagatacctttattaaaccccgatcatga

Transcript

g10501.t1

ATGGTCATGACCAATGATTCATCAAGCTCTGTCAAATTGGACGAATCCATTGATTTTTTGCTGAAACAAGATTTATCTGGTCCAAAAGCTCGGATCAAGGTGGAAACTGCACTTGCAGTTGAAATGATTGAAGACGTAGCTCATAACAACGGATTACAGCAAGATCAAGTGGAGAATTTGGTCAAGCTCGTTACCAGTGCAAAATATGCTGATAGTGTATCATCTAGACTTGTAAAGTGCCTCATTCCTCAGGGGTTAGTTCCTTCATCAGCTGTTGTCAAAGTGGCTTCCAGGATGTGCACCAACAAATTGTCTCTTAATATGAAGGTTTTGTTGGTTCGATGgatattaataatatttaaccTAATCGATGACCTGAAAGATTTGCATTCTTTGTATggagtattttttcttttcttggaaaGTAATATGTTGTGTCCCCATATCTGTCATCTCCTTTATTATCTGACCAGAAAAGAGGATGtGCAGCACTTCAGGATTAAAAAGCTTTTAGATCTCCAAAGCCGAATGGGAATCAAACCACACTTGGTTGGCTTAATTTCCATCTACAAGATACACTGTCCAAATCTTGTAAGTTTGGCATCATCATCTTCAAATAAGAAACTGTGGTTTAAGGAATCAGACATGTCTTGGAGAGAGGCAATCAAGAAAGTCcagACTAGATACAATGCACCAATTTTGCTGGACAGCTTCCTCCTTTCAGTGGGAGTAACATGCAAGTCTCCATTACCCAAGAAAAGGAAGTTCTGTCACAGGGTCAGCATTCCTGAAATATATACCACTGCCTTGCCAGAAAAGAAGATTTCTAGTGAGCAGCCTTCTTCTTTCAAAGATCTTCTCAACAGTATTGACATTGTTGAGtttccaAGTCAGGTTGCTTGTGTCCTCAACTCTCCTCTCTTACAACATGCATTGTCCTGTAACCCAGAGTTTGTTGTGCTTCAGAGATTAAACTTCTGGCTCAATCATTCTTTGTGTGAAGAATTTTTTACTGGATCAGAGGCTTATACAGATGCAAGCAGCATGTTACTATTGCAGAAACTGGAGAATTTTACATGTTTTATTCAGGAGTCTATACCTGCCTTGGAAGCCTTTTTGGTGCAGTACCTGTTTACATGGAATGGAAAAGACTTCAGACCACTGTTACTGAAACTCATTGCTCAGTTAAGCTTATGGCCATTTCAACGTTTCAATGACTTAATCCTTGAACACCTcagaaaactttttttctcctcatCAGTTTACACCAAGTGCCAAATAATGTACTGTTTTACCAGTTTGTTGAGAAATTTCTTGGCTGTTGAGTTACCAAGGCAACAAGAATTACTTCAGGAGGAAAGATCAAACATAGCATGTGTGTCGATGTTTGTTGAAGATGAAGTGGCACCGTTTGATCCCCTAAAGACTGTGTATGACTTTATTCAGTTTGTGGACAAGATTTGTGTTGTAGGACTCCAGGTCGAAGAAGACCACGCCCTTTTGCAGCATTGGGTTTTGAATTTTTTCGAATTGGTATCAACTGCCCATCGGCAGTTCTCCCTTCCTTTTGTGGAGATTCCATCATCAGGCATCATTTACAGGATGCTGTTTTCAGATAACTCAATGGCTGTCTCAAGATTGTGTCAAATCGTCGTAAATTACAAGAGGGAGTTCGAATCGCTCAAAACATCACAAGGAGATTCACAGGCGCCTTGCTTGGCATTTCCGGATGGATTTCAAAGCATACAAAGATTGAATCAGTACATTCTGGATATTTGCGACAGCCTATGGAGAAACAAAGCTTTCATCGATAAAGAGAAATCGTTTTGTTTCAGTATGCCAAGCTCAGTGACTGATTCTCTTGCTGTAAATCATATGAACGAGTTATTTTCAATCCACCATCACGTGGCTTTGATTGGGGAGGCCTGGAAATTCCTCCATCAGACTCAGCCTGAAGAAATGAAACTCACCCCGAGCTTGATAAAGGGTCGTTCAAGACGAGCCTTTTTGGAGCATCTGATGCAACGAAATATTGGTGGGATTCTCACTTTCCTAGATACCTTTATTAAACCCCGATCATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8AYS7	Centromere protein I OS=Gallus gallus OX=9031 GN=CENPI PE=1 SV=1
Q63517	Centromere protein I OS=Rattus norvegicus OX=10116 GN=Cenpi PE=2 SV=1
Q8K1K4	Centromere protein I OS=Mus musculus OX=10090 GN=Cenpi PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008139 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07778 all species →	CENP-I	Mis6	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012485 all species →	Family	Centromere protein I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48208 all species →	CENTROMERE PROTEIN I	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000070 all species →	Biological Process	mitotic sister chromatid segregation	Interproscan
GO:0000939 all species →	Cellular Component	inner kinetochore	Interproscan
GO:0034080 all species →	Biological Process	CENP-A containing chromatin assembly	Interproscan
GO:0000776 all species →	Cellular Component	kinetochore	Interproscan
GO:0034508 all species →	Biological Process	centromere complex assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11501	CENPI; centromere protein I	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.