Detailed information of g1054.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_001638191.3, protein FAM227B [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q96M60Protein FAM227B OS=Homo sapiens OX=9606 GN=FAM227B PE=1 SV=2
Q4R7D5Protein FAM227B OS=Macaca fascicularis OX=9541 GN=FAM227B PE=2 SV=1
Q05AW7Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis OX=8355 GN=ctu1 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF16503zn-ribbon_14Zinc-ribbonFamilyInterproscan
PF04991LicDLicD familyDomainInterproscan
PF06602Myotub-relatedMyotubularin-like phosphatase domainDomainInterproscan
PF03351DOMONDOMON domainDomainInterproscan
PF10350DUF2428THADA/TRM732, DUF2428DomainInterproscan
PF14922FWWhProtein of unknown functionFamilyInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan
PF00412LIMLIM domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR032442DomainCytoplasmic tRNA 2-thiolation protein 1, C-terminalInterproscan
IPR007074FamilyLicD familyInterproscan
IPR052942FamilyLipopolysaccharide cholinephosphotransferaseInterproscan
IPR010569DomainMyotubularin-like, phosphatase domainInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR030564FamilyMyotubularin familyInterproscan
IPR003595DomainProtein-tyrosine phosphatase, catalyticInterproscan
IPR016130Active_siteProtein-tyrosine phosphatase, active siteInterproscan
IPR045266DomainCopper-dependent monooxygenases, DOMON domainInterproscan
IPR005018DomainDOMON domainInterproscan
IPR051954FamilytRNA (32-2'-O)-methyltransferase regulator THADAInterproscan
IPR019442DomainTHADA/TRM732, DUF2428Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR029417FamilyFAM227 ProteinInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR047169FamilyInsulin gene enhancer protein ISL-1/2-likeInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR051275FamilyCellular adhesion and signaling domain-containing proteinInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR11807ATPASES OF THE PP SUPERFAMILY-RELATEDInterproscan
PTHR43404LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICDInterproscan
PTHR10807MYOTUBULARIN-RELATEDInterproscan
PTHR33327ENDONUCLEASEInterproscan
PTHR14387THADA/DEATH RECEPTOR INTERACTING PROTEINInterproscan
PTHR33560PROTEIN FAM227BInterproscan
PTHR24204INSULIN GENE ENHANCER PROTEINInterproscan
PTHR11640NEPHRINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0002143Biological ProcesstRNA wobble position uridine thiolationInterproscan
GO:0002144Cellular Componentcytosolic tRNA wobble base thiouridylase complexInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0004438Molecular Functionphosphatidylinositol-3-phosphate phosphatase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0010506Biological Processregulation of autophagyInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0019903Molecular Functionprotein phosphatase bindingInterproscan
GO:0046856Biological Processphosphatidylinositol dephosphorylationInterproscan
GO:0052629Molecular Functionphosphatidylinositol-3,5-bisphosphate 3-phosphatase activityInterproscan
GO:0016311Biological ProcessdephosphorylationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0007409Biological ProcessaxonogenesisInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0048665Biological Processneuron fate specificationInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09370ISL1; insulin gene enhancer protein ISL-1-Transcription factorsko03000deepkoala

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