Gene detail

Detailed information of g10557.t1.1 in Blastomussa wellsi

Genomic Location: :...
NR annotation: XP_020624985.1, uncharacterized protein LOC110062426 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

g10557.t1

ATGTTTTTATTTCCAACTGTGGACAGATTTCATCCAAAGACCAATTGGTTCAGAGCTTCCTTGTATGGAAATACACACAAGTCCCATGGCAGTTCAGAAATTGATAACAGCCGTAAAACTGATGAGGAGACAAATGGAGGATCAAAGGAAAACAGTTTGGGTGACAAAAGTAATTGCTTTTGCACACACACCAACTCCTCGCAAGGAAAAAAGAGACCAGAAATTCAAGATGCAAGTTCTTACAACTCCAGGTTAAAACGAAAATCTGATTTTGATGGAAACAgGACTGTGTCAACTTGCTCATCAGGTAGTTCGTCTAGTGACAGTGATGAAGATGTCGACATTGAAGCAGATTCACCAAAAAGAGTAAAGATTTCTCCAGGTGAGAGGTCTGATAAAAGAAGTCCAGTTATTGCAGATGAGAGGTTGAATTTCTCTGACAGTAAACCAGGAAGAGTGCGTTGTGCATTGTGCAACTGCGTGAATAACAGTGTGTTGGGACAGGGAGACCTGATATGTTTTGGAAGAATATCTGGCTTTCCAAGACATTCAACAAGCCCACAGCAACAGCAGAACTTTGCATTGGCTTATGGAAACCCGCACTATCCCAGTGTTGGTGGGCGACACCCTTCGCATGGAAACAGAAGCCCCCTTGATGGAGAACATCATGATCACAGGCAGTACCCCAGTGTTGGTGGGTCCCGTCCTTCCCATGGAAGCAGAAGCCCCCATGATCACAGACAGTATACCTGGACACACAGGTCTGAGGCTGCTAATTCGACAGTGCACCATGGCCGTCAGATCCATGGCGAAGTGCCTGTCAGgACAAGAAGCCCTGATGGAAAATCCACCAGCAACAGGCAGTCACCAGCTCCTCAAGAAGACCTTTCCTGTGTAGGGTTTGAAGAGGAACCAGATTTGGTTGATCTGTGTGACACTTCTGGTCACATATGGGTGCACGAGAGGTGTGCAGCGTGGACACTGGCTTCTATAGCAACCAAGTCATCAGCACAATTTACAGTGGACTTGACAAATCAGATTCTATCAAAGAAGTGTACTTTTTGTGGTCGTTTTGGTGCTAGTGTTGTATGTGAGATGTCTGACTGTGGAAGAATATACCACTACCCTTGTGCAATGGCTGCTAGGACTTACCAGGAtgtgaaaacaatgaaactttATTGTGCAAGTCACGACGATATAATTAGGAGAATAGCATTCTGTGACAGATGCCATCAAAGTGGTGAGTTATCACAACTGTTGCTGTGCACAAGATGTAACTGCCATTACCACAGTTACTGCTGTTCACCACCTGTTCGAGCTACTGAGTCAGTCAGGGTGGGCTGGGAATGTACTCAGTGCAAGTCTTGCCAGGCCTGCAGGCATAGTTCAACCAAAGACAAGTTGTTGATATGCCGCAGCTGTGACAAGGGTTACCATCCTCTATGTACGATACCTGTGGCTAACTCTACAGAAAAGTTAGGCTGGAAGTGTGAGAAGTGTCGACAGTGCAGGCAGTGTGGAACACAGAAGGCATCATGCTGGCACATTGATTACACTTTGTGTGACAAGTGTTaccaaaacaaacacaaaacaaatcgGTGTCCTCTTTGTAATGAAGAACAAGGCAATCAGAAAGTGATCCAGTGTGATTCATGTAGCAGATGGATTCACACTGTTTGTGACAGTATCACTGATGAGATCTACAGGAAACTTGAGGAAGATAGCACCATCATTTATGTGTGCAAAATTTGTAGAGAGGAAGTTGAGACCATCAAAAAAGAATGTAGACGAGAGGTTAAAACAGATCCAACAGAAGTGGAAGAGATATCTCCAGTCACGGCCATGGTTTTATCCCAAGAAATGTACAAAGGGCAAAATGCAAGGCACAGTTCTGTTGTCACCACTAGCGTGGCTGCCACTCCCTTGTCTATGTCGTGGATGACATCAGAGCCGGTCCAGTGGTCTCGATTAAGGATGACGTATTCCTTTGAATATTTCATTATGAAACAGTATGGTAAAGTGTTACTCTAG

Transcript

g10557.t1

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13771	zf-HC5HC2H	PHD-like zinc-binding domain	Domain	Interproscan
PF00628	PHD	PHD-finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034732	Domain	Extended PHD (ePHD) domain	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45888	HL01030P-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan
GO:0042800	Molecular Function	histone H3K4 methyltransferase activity	Interproscan
GO:0044666	Cellular Component	MLL3/4 complex	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan