Detailed information of g1058.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAB4021999.1, Hypothetical predicted protein [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9IB89Zinc finger protein ZIC 5 OS=Xenopus laevis OX=8355 GN=zic5 PE=2 SV=1
Q8JJC0Zinc finger protein ZIC 1 OS=Gallus gallus OX=9031 GN=ZIC1 PE=1 SV=1
Q9YIB7Zinc finger protein ZIC 2-B OS=Xenopus laevis OX=8355 GN=zic2-b PE=2 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18366zf_ZICZic proteins zinc finger domainDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF12400STIMATESTIMATE familyFamilyInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan
PF11380Stealth_CR2Stealth protein CR2, conserved region 2FamilyInterproscan
PF17102Stealth_CR3Stealth protein CR3, conserved region 3FamilyInterproscan
PF00066NotchLNR domainDomainInterproscan
PF17101Stealth_CR1Stealth protein CR1, conserved region 1FamilyInterproscan
PF17103Stealth_CR4Stealth protein CR4, conserved region 4FamilyInterproscan
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043359FamilyC2H2-type zinc-finger protein GLI-likeInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR041643DomainZIC protein, zinc finger domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR022127FamilyStore-operated calcium entry regulator STIMATE/YPL162CInterproscan
IPR051697FamilyPatched domain-containing proteinInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR050111FamilyC-type lectin and snaclec domain-containing proteinInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR039477DomainILEI/PANDER domainInterproscan
IPR021520DomainStealth protein CR2, conserved region 2Interproscan
IPR031357DomainStealth protein CR3, conserved region 3Interproscan
IPR000800DomainNotch domainInterproscan
IPR047141FamilyStealth familyInterproscan
IPR031358DomainStealth protein CR1, conserved region 1Interproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR031356DomainStealth protein CR4, conserved region 4Interproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR017975Conserved_siteTubulin, conserved siteInterproscan
IPR002453FamilyBeta tubulinInterproscan
IPR023123Homologous_superfamilyTubulin, C-terminalInterproscan
IPR000217FamilyTubulinInterproscan
IPR037103Homologous_superfamilyTubulin/FtsZ-like, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45718TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUSInterproscan
PTHR24178MOLTING PROTEIN MLT-4Interproscan
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR31735VACUOLAR MEMBRANE PROTEIN YPL162CInterproscan
PTHR10796PATCHED-RELATEDInterproscan
PTHR22803MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATEDInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24045-Interproscan
PTHR11588TUBULINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0097543Cellular Componentciliary inversin compartmentInterproscan
GO:1904108Biological Processprotein localization to ciliary inversin compartmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0016772Molecular Functiontransferase activity, transferring phosphorus-containing groupsInterproscan
GO:0003976Molecular FunctionUDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activityInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0016256Biological ProcessN-glycan processing to lysosomeInterproscan
GO:0046835Biological Processcarbohydrate phosphorylationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10419DYNLRB, DNCL2; dynein light chain roadblock-type-Transcription factorsko03000deepkoala
Lysosomeko04142deepkoala
Exosomeko04147deepkoala
Transportersko02000deepkoala
Cytoskeleton proteinsko04812deepkoala

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