Gene detail

Detailed information of g10607.t1 in Acropora digitifera

Genomic Location: chr5Alt:5248160...5263094
NR annotation: XP_029195176.2, ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

chr5Alt.g10607.t1

TCCCATCCCTACTAAGTCCAGTCACACTTACATCCAGTTGGTCAAAAAAAATTCAGTTCTTTCCCACATCACGCTCCAATCTCTCATTCACTTGATAGCAGGTGCACTTCTCCACAACCATTCCTCACGAGTTTTCGAGGTTTGGCACAGCCCTAACCAACTAGCACATCGCAAACGGGACACCCTGACCCTCCCTGACGGTCGCTGTATTGGATGCCTCCCCGCAATGCAAATCGTACAGCGGTGAAACGCCAAAAAGCACGTTTCCAACATGGCGGCAGTATCAACTTGATCTGTGATGAAAATTCAACTTTTGACTGATAATTCCTACGTCTAGTGTGTCAACTATGTCGTTTGTTCCAGCTGGAGCTGAGGATTCGGATTCAGAAGATGATGGGTTTTATATGGGAAGTTCTTACACCGGGAACTCAAATCATAATAAGTTTGGTATGAGGAATGGTGGCGACATGAGCAGATCCGTATCTTCCTCCAAAGGTTTCACCACGATGCCTGCTGGCGCGGAGTCTGACGAAGAGGACAGTGATGGCTTTGAAGTTAACAGCACACCATTTCATTCTGTTTCTTCAACTGCATCTCAAACTTATGAGAAAAAACCGAACATGAACTTAAATAAATCAAATGATGTTGTTAGTTTTTCACATACTACATCTGCTGTGGCTGTCGGCAAAGGACAGAATATAAAGCAGAGAGGACGAGGAAGAGGGGGGTTTCCAAGACCCCCGGCATCATTCAGCAATCGAGGAAAACCTGCCAGAAGGGGTAATTTCATTCCAAGCAATGGATCCAACAAACAGGCAGATACCAGGAAAGCAGCATTATCACTTGCTGTGGATGATTTGCGAGTTGCAATTCAAAAAGGAAATATTGCTGCAGTTCAGAAATATTTAGATGACGGTATTGATCCTGATGTTCATCTTAAGTCAGGCTGGACATCTTTGATGCTTGCAGCAAGCACAGCATCTTCAGATCTTGTGGAGTTACTAATAAGCAGAGGAGCAAATGCCAATTTTCAGAAAGAAATGTACACAGTACTTATGGCAACTTGTGCAGCTTCAAGGTCAGTTGCAGAAGAGCAAGTTCTCAGATGTGTGGAGCTTTTGCTGGGGAAGAATGCTCGGGTCAATGTTTATGACAAGTATCGCATGTCCCCGTTGATGTATGCGGCAAGGGAGGGGCGGGTGACTGTCTGTGAGAAGTTGCTTGAGCACGGTGCAGAGGTTAACAAACAGGAAATGCGAGGCTGGACGTCGTTGGCATTTGCAGCTGGTCGGGGTCATGGAAGAGTCGTTCGCACTCTGCTGGATCGTGGAGCAGATGCTAACATTTGCACCAATGATGGACAAACACCAAGTGACATTGCATATGCCAGTGATTACCCGAGGCTTTCAGACGTCATTGCACTGGCTGCAAGTGGTAAGCCGACACCTAGTACAGAAGTTGCTTTGGATGCGGGAAAACCAACCATCGGTCCTATTGACGACAGTCCTCACACATATGGCAGCCTTGAAATGTTTCTCATGGGTCAGGGTTTGAAACATTTGTTGCCAAAATTTCAGGAACACAAAGTAACTTTTGATGGACTTTTGAGTTTGACAGAAAAGGAACTTGACCAGATGGGGATTACTCAGGTGGGTGTTCGAACCAAGATCTTGGATGGCATTCGAGAAGTCCACAAGAAAGAGTGGGACGCTTCTAGCTTACAGACAACGGAGAAGCACTCATTGAGTGCCGAAGAGGTCACAGTTATTCTGGCAAATGTGTCTCGACATTTGACTTTTTTAAGGAGCAGTGTCTCTTTCGTGCAGAAACATTTAAACACCGTCAGGGAGCCCTTGGATTTCGTACAGGATGTTACGGCGGCCGAAGGGATGTCGTTATACTGCAGAGAAGCAAATGAAGCTTCTCAGGAATTGAACGAAGAACTTGACTCCGTCTTCAAGCGAATTTCTCAGATCAACTCTAAAGTATCGAAAACTGCGCCCGATCTGATCGTCGATCAAAAGCCACAGCCAACCCAACACTCGTCAAAGGGAAGTCTGGGGCTAGTCTTGACGGGTACCGCAACCTTTGCCGTAGGTGCATTCTTGGTTCATCGATTCTGGCCCAGCACGTGATCTAACTCGTGATTTATTGAAGAAACAGAGTGCAAGGGGACCCCAGGTCAAAGGTCACTGTGTTATCCGCGCAGTTTACAAAGGTCCGCCATGGCCGCAAACACCGTTCTGCAATTGTGAACTGCTCTCAACGTTTCATGGCAAAATTTGGCCGTTGTCGCCGCTCATTACTTGAACAAATTGTAAAGATTTAAACGTAAATATCATTGTAAAGATTAAAAACTCTGTGTATCTTGATTTTATTCCACAAATGTAGAAGAATTCGTTCCATTACTTAATGATAATAAAACGCTGTTTGATTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q09YK6	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 OS=Ateles geoffroyi OX=9509 GN=ASZ1 PE=3 SV=1
Q2QLB5	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 OS=Plecturocebus moloch OX=9523 GN=ASZ1 PE=3 SV=1
Q8WWH4	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 OS=Homo sapiens OX=9606 GN=ASZ1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00536 all species →	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13857 all species →	Ank_5	Ankyrin repeats (many copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR042650 all species →	Domain	ASZ1, SAM domain	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24157 all species →	ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0034587 all species →	Biological Process	piRNA processing	Interproscan
GO:0071546 all species →	Cellular Component	pi-body	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18410	ASZ1, GASZ; ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.