Gene detail

Detailed information of g10609.t1 in Acropora digitifera

Genomic Location: chr5Alt:5274765...5280329
NR annotation: XP_029195179.1, protein Wnt-2b-A-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q98SN7	Protein Wnt-2b OS=Gallus gallus OX=9031 GN=WNT2B PE=1 SV=1
P87387	Protein Wnt-2b-A OS=Xenopus laevis OX=8355 GN=wnt2b-a PE=2 SV=1
O70283	Protein Wnt-2b OS=Mus musculus OX=10090 GN=Wnt2b PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00110 all species →	wnt	wnt family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009140 all species →	Family	Wnt-2 protein	Interproscan
IPR018161 all species →	Conserved_site	Wnt protein, conserved site	Interproscan
IPR005817 all species →	Family	Wnt	Interproscan
IPR043158 all species →	Homologous_superfamily	Wnt, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12027 all species →	WNT RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005102 all species →	Molecular Function	signaling receptor binding	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0016055 all species →	Biological Process	Wnt signaling pathway	Interproscan
GO:0005109 all species →	Molecular Function	frizzled binding	Interproscan
GO:0005125 all species →	Molecular Function	cytokine activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0030182 all species →	Biological Process	neuron differentiation	Interproscan
GO:0045165 all species →	Biological Process	cell fate commitment	Interproscan
GO:0060070 all species →	Biological Process	canonical Wnt signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00182	WNT2; wingless-type MMTV integration site family, member 2	-	Glycosaminoglycan binding proteins	ko00536	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.