Detailed information of g1064.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047132197.1, lysyl oxidase homolog 2B [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A6H737Lysyl oxidase homolog 2 OS=Bos taurus OX=9913 GN=LOXL2 PE=2 SV=1
P58022Lysyl oxidase homolog 2 OS=Mus musculus OX=10090 GN=Loxl2 PE=1 SV=2
F1QQC3Lysyl oxidase homolog 2A OS=Danio rerio OX=7955 GN=loxl2a PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyUBD|Other|SH3
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13975gag-asp_proteasgag-polyprotein putative aspartyl proteaseDomainInterproscan
PF00620RhoGAPRhoGAP domainDomainInterproscan
PF14604SH3_9Variant SH3 domainDomainInterproscan
PF01061ABC2_membraneABC-2 type transporterFamilyInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF01186Lysyl_oxidaseLysyl oxidase FamilyInterproscan
PF00040fn2Fibronectin type II domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF07544Med9RNA polymerase II transcription mediator complex subunit 9FamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00071RasRas familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000198DomainRho GTPase-activating protein domainInterproscan
IPR051627FamilySLIT-ROBO Rho GTPase-activatingInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR001452DomainSH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR050352FamilyATP-binding cassette subfamily G transportersInterproscan
IPR013525DomainABC-2 type transporter, transmembrane domainInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR001190DomainSRCR domainInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR050912FamilyLysyl oxidase-like proteinInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR019828Conserved_siteLysyl oxidase, conserved siteInterproscan
IPR001695FamilyLysyl oxidaseInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045227FamilyWD repeat-containing protein WDR18/Ipi3/RID3Interproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR011425FamilyMediator of RNA polymerase II transcription subunit 9Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050304FamilyMicrotubule-severing AAA ATPaseInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR051065FamilyRas-related small GTPaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR14166SLIT-ROBO RHO GTPASE ACTIVATING PROTEINInterproscan
PTHR48041ABC TRANSPORTER G FAMILY MEMBER 28Interproscan
PTHR45817LYSYL OXIDASE-LIKE-RELATEDInterproscan
PTHR18763WD-REPEAT PROTEIN 18Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR23074AAA DOMAIN-CONTAININGInterproscan
PTHR45704RAS-LIKE FAMILY MEMBER 11Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007165Biological Processsignal transductionInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030336Biological Processnegative regulation of cell migrationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0004720Molecular Functionprotein-lysine 6-oxidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0018057Biological Processpeptidyl-lysine oxidationInterproscan
GO:0005507Molecular Functioncopper ion bindingInterproscan
GO:0016641Molecular Functionoxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptorInterproscan
GO:0005656Cellular Componentnuclear pre-replicative complexInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0097344Cellular Componentobsolete Rix1 complexInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016592Cellular Componentmediator complexInterproscan
GO:0140603Molecular Functionobsolete ATP hydrolysis activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20638ARHGAP17, RICH1; Rho GTPase-activating protein 17-Enzymes with EC numbers-deepkoala
GTP-binding proteinsko04031deepkoala
Membrane traffickingko04131deepkoala

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