Detailed information of g1066.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_043197567.1, uncharacterized protein K02A2.6-like [Amphibalanus amphitrite]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P0CT41Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1
P0CT34Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1
P0CT35Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00406ADKAdenylate kinaseDomainInterproscan
PF02752Arrestin_CArrestin (or S-antigen), C-terminal domainDomainInterproscan
PF00339Arrestin_NArrestin (or S-antigen), N-terminal domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071DomainHigh mobility group box domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR039655FamilyHMG box-containing protein 1Interproscan
IPR042635FamilyMEGF10/SREC1/2-likeInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000850FamilyAdenylate kinase/UMP-CMP kinaseInterproscan
IPR006266FamilyUMP-CMP kinaseInterproscan
IPR033690Conserved_siteAdenylate kinase, conserved siteInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR011022DomainArrestin C-terminal-like domainInterproscan
IPR011021DomainArrestin-like, N-terminalInterproscan
IPR014752Homologous_superfamilyArrestin-like, C-terminalInterproscan
IPR050357FamilyArrestin domain-containing proteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR050776FamilyAnkyrin Repeat and Cyclin-Dependent Kinase InhibitorInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15499HMG BOX-CONTAINING PROTEIN 1Interproscan
PTHR24043SCAVENGER RECEPTOR CLASS FInterproscan
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan
PTHR23359NUCLEOTIDE KINASEInterproscan
PTHR11188ARRESTIN DOMAIN CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR24201ANK_REP_REGION DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005044Molecular Functionscavenger receptor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0019205Molecular Functionnucleobase-containing compound kinase activityInterproscan
GO:0004127Molecular Function(d)CMP kinase activityInterproscan
GO:0006207Biological Process'de novo' pyrimidine nucleobase biosynthetic processInterproscan
GO:0006221Biological Processpyrimidine nucleotide biosynthetic processInterproscan
GO:0009041Molecular FunctionUMP/dUMP kinase activityInterproscan
GO:0004017Molecular Functionadenylate kinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00939adk, AK; adenylate kinaseEC:2.7.4.3
Exosomeko04147deepkoala

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