Gene detail

Detailed information of g10683.t1.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_047130013.1, putative ATP-dependent RNA helicase TDRD12 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q587J7	Putative ATP-dependent RNA helicase TDRD12 OS=Homo sapiens OX=9606 GN=TDRD12 PE=1 SV=2
A9CPT4	Tudor domain-containing protein 1 OS=Oryzias latipes OX=8090 GN=tdrd1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00567	TUDOR	Tudor domain	Domain	Interproscan
PF04969	CS	CS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035437	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan
IPR008978	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR007052	Domain	CS domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002999	Domain	Tudor domain	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22655	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0042078	Biological Process	germ-line stem cell division	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18409	TDRD12; ATP-dependent RNA helicase TDRD12	EC:5.6.2.5	Chromosome and associated proteins	ko03036	deepkoala