Detailed information of g10684.t1 in Acropora digitifera

Genomic Location: chr5Alt:6400065...6437661
NR annotation: XP_044177261.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114974735 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00629
all species →		MAMMAM domain, meprin/A5/muDomainInterproscan
PF00057
all species →		Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF07691
all species →		PA14PA14 domainDomainInterproscan
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036055
all species →		Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR000998
all species →		DomainMAM domainInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR002172
all species →		RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR011658
all species →		DomainPA14 domainInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR050111
all species →		FamilyC-type lectin and snaclec domain-containing proteinInterproscan
IPR023415
all species →		Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR037524
all species →		DomainPA14/GLEYA domainInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22803
all species →		MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0038023
all species →		Molecular Functionsignaling receptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g10684.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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