Gene detail

Detailed information of g1069.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_047131783.1, uncharacterized protein LOC124810748 [Hydra vulgaris]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0C6B8	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1
A2AVA0	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Mus musculus OX=10090 GN=Svep1 PE=1 SV=1
Q4LDE5	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SVEP1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000263 (this species only)
Orthogroup (gene family)	OG0001683 (this species only)
Orthogroup (gene family)	OG0005735 (this species only)
Orthogroup (gene family)	OG0006605 (this species only)
Orthogroup (gene family)	OG0008383 (this species only)
Orthogroup (gene family)	OG0009331 (this species only)
Orthogroup (gene family)	OG0014802 (this species only)
Orthogroup (gene family)	OG0025404 (this species only)
Orthogroup (gene family)	OG0048268 (this species only)
Orthogroup (gene family)	OG0048282 (this species only)
Orthogroup (gene family)	OG0059853 (this species only)
Orthogroup (gene family)	OG0059892 (this species only)
Orthogroup (gene family)	OG0171798 (this species only)
Orthogroup (gene family)	OG0172187 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00385 all species →	Chromo	Chromo (CHRromatin Organisation MOdifier) domain	Domain	Interproscan
PF10374 all species →	EST1	Telomerase activating protein Est1	Repeat	Interproscan
PF10373 all species →	EST1_DNA_bind	Est1 DNA/RNA binding domain	Repeat	Interproscan
PF13649 all species →	Methyltransf_25	Methyltransferase domain	Domain	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF00147 all species →	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF07699 all species →	Ephrin_rec_like	Tyrosine-protein kinase ephrin type A/B receptor-like	Domain	Interproscan
PF02494 all species →	HYR	HYR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR051219 all species →	Family	Heterochromatin-associated chromo domain-containing protein	Interproscan
IPR023780 all species →	Domain	Chromo domain	Interproscan
IPR000953 all species →	Domain	Chromo/chromo shadow domain	Interproscan
IPR036361 all species →	Homologous_superfamily	SAP domain superfamily	Interproscan
IPR003034 all species →	Domain	SAP domain	Interproscan
IPR016197 all species →	Homologous_superfamily	Chromo-like domain superfamily	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR045153 all species →	Family	Est1/Ebs1-like	Interproscan
IPR019458 all species →	Domain	Telomerase activating protein Est1-like, N-terminal	Interproscan
IPR018834 all species →	Domain	DNA/RNA-binding domain, Est1-type	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR041698 all species →	Domain	Methyltransferase domain 25	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR050125 all species →	Family	G-protein coupled receptor opsins	Interproscan
IPR002181 all species →	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR014716 all species →	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR050373 all species →	Family	Fibrinogen C-terminal domain-containing protein	Interproscan
IPR036056 all species →	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR052071 all species →	Family	Signal peptide, CUB and EGF-like domain-containing protein	Interproscan
IPR011641 all species →	Domain	Tyrosine-protein kinase ephrin type A/B receptor-like	Interproscan
IPR003410 all species →	Domain	HYR domain	Interproscan
IPR036364 all species →	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR000082 all species →	Domain	SEA domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22812 all species →	CHROMOBOX PROTEIN	Interproscan
PTHR15696 all species →	SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7	Interproscan
PTHR43591 all species →	METHYLTRANSFERASE	Interproscan
PTHR24240 all species →	OPSIN	Interproscan
PTHR19143 all species →	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan
PTHR24184 all species →	SI:CH211-189E2.2	Interproscan
PTHR24046 all species →	SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005721 all species →	Cellular Component	pericentric heterochromatin	Interproscan
GO:0006325 all species →	Biological Process	chromatin organization	Interproscan
GO:0035064 all species →	Molecular Function	methylated histone binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000184 all species →	Biological Process	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Interproscan
GO:0005697 all species →	Cellular Component	telomerase holoenzyme complex	Interproscan
GO:0042162 all species →	Molecular Function	telomeric DNA binding	Interproscan
GO:0070034 all species →	Molecular Function	telomerase RNA binding	Interproscan
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007602 all species →	Biological Process	phototransduction	Interproscan
GO:0008020 all species →	Molecular Function	G protein-coupled photoreceptor activity	Interproscan
GO:0071482 all species →	Biological Process	cellular response to light stimulus	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0009986 all species →	Cellular Component	cell surface	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14409	SMG7, EST1C; protein SMG7	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.