Detailed information of g107.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBU2643226.1, threonine--tRNA ligase [bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6M9L0Threonine--tRNA ligase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=thrS PE=3 SV=1
Q256F9Threonine--tRNA ligase OS=Chlamydia felis (strain Fe/C-56) OX=264202 GN=thrS PE=3 SV=1
B0B8F5Threonine--tRNA ligase OS=Chlamydia trachomatis serovar L2 (strain ATCC VR-902B / DSM 19102 / 434/Bu) OX=471472 GN=thrS PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyTF_bZIP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00019TGF_betaTransforming growth factor beta like domainDomainInterproscan
PF13517FG-GAP_3FG-GAP-like repeatRepeatInterproscan
PF00704Glyco_hydro_18Glycosyl hydrolases family 18DomainInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00801PKDPKD domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF02870Methyltransf_1N6-O-methylguanine DNA methyltransferase, ribonuclease-like domainDomainInterproscan
PF01035DNA_binding_16-O-methylguanine DNA methyltransferase, DNA binding domainDomainInterproscan
PF00170bZIP_1bZIP transcription factorCoiled-coilInterproscan
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF00822PMP22_ClaudinPMP-22/EMP/MP20/Claudin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017948Conserved_siteTransforming growth factor beta, conserved siteInterproscan
IPR029034Homologous_superfamilyCystine-knot cytokineInterproscan
IPR015615FamilyTransforming growth factor-beta-relatedInterproscan
IPR001839DomainTransforming growth factor-beta, C-terminalInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR024881FamilyT-cell immunomodulatory proteinInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR001223DomainGlycoside hydrolase family 18, catalytic domainInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR052076FamilyTransient receptor potential cation channelInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR000601DomainPKD domainInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR008332DomainMethylguanine DNA methyltransferase, ribonuclease-like domainInterproscan
IPR014048DomainMethylated-DNA-[protein]-cysteine S-methyltransferase, DNA bindingInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036631Homologous_superfamilyMethylated DNA-protein cysteine methyltransferase domain superfamilyInterproscan
IPR036217Homologous_superfamilyMethylated DNA-protein cysteine methyltransferase, DNA binding domainInterproscan
IPR001497Active_siteMethylated-DNA-[protein]-cysteine S-methyltransferase, active siteInterproscan
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR002320FamilyThreonine-tRNA ligase, class IIaInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR033728DomainThreonine-tRNA ligase catalytic core domainInterproscan
IPR004095DomainTGSInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR047246DomainThreonine-tRNA ligase, class IIa, anticodon-binding domainInterproscan
IPR050579FamilyPeripheral Myelin Protein 22/Epithelial Membrane ProteinInterproscan
IPR004031FamilyPMP-22/EMP/MP20/ClaudinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11848TGF-BETA FAMILYInterproscan
PTHR13412T-CELL IMMUNOMODULATORY PROTEIN HOMOLOGInterproscan
PTHR46066CHITINASE DOMAIN-CONTAINING PROTEIN 1 FAMILY MEMBERInterproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan
PTHR47143TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESSInterproscan
PTHR46730POLYCYSTIN-1Interproscan
PTHR10815METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASEInterproscan
PTHR46004CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN AInterproscan
PTHR11451THREONINE-TRNA LIGASEInterproscan
PTHR10671EPITHELIAL MEMBRANE PROTEIN-RELATEDInterproscan
PTHR31511PROTEIN CBG23764Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008083Molecular Functiongrowth factor activityInterproscan
GO:0005125Molecular Functioncytokine activityInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0070492Molecular Functionoligosaccharide bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0003908Molecular Functionmethylated-DNA-[protein]-cysteine S-methyltransferase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0035497Molecular FunctioncAMP response element bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0004829Molecular Functionthreonine-tRNA ligase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006435Biological Processthreonyl-tRNA aminoacylationInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17525CHID1; chitinase domain-containing protein 1-Transfer RNA biogenesisko03016deepkoala
Transcription factorsko03000deepkoala
Lectinsko04091deepkoala

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