Genomic Location: :...
NR annotation: XP_047136980.1, cleavage and polyadenylation specificity factor subunit 2 [Hydra vulgaris]
| CDS | |||||
| Transcript |
| Protein |
| Uniprot term | Description |
|---|---|
| Q10568 | Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus OX=9913 GN=CPSF2 PE=1 SV=1 |
| Q9P2I0 | Cleavage and polyadenylation specificity factor subunit 2 OS=Homo sapiens OX=9606 GN=CPSF2 PE=1 SV=2 |
| Q9W799 | Cleavage and polyadenylation specificity factor subunit 2 OS=Xenopus laevis OX=8355 GN=cpsf2 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13299 | CPSF100_C | Cleavage and polyadenylation factor 2 C-terminal | Family | Interproscan |
| PF07521 | RMMBL | Zn-dependent metallo-hydrolase RNA specificity domain | Motif | Interproscan |
| PF10996 | Beta-Casp | Beta-Casp domain | Domain | Interproscan |
| PF16661 | Lactamase_B_6 | Metallo-beta-lactamase superfamily domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR035639 | Domain | CPSF2, metallo-hydrolase domain | Interproscan |
| IPR025069 | Domain | Cleavage and polyadenylation specificity factor 2, C-terminal | Interproscan |
| IPR022712 | Domain | Beta-Casp domain | Interproscan |
| IPR011108 | Domain | Zn-dependent metallo-hydrolase, RNA specificity domain | Interproscan |
| IPR036866 | Homologous_superfamily | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Interproscan |
| IPR027075 | Family | Cleavage and polyadenylation specificity factor subunit 2 | Interproscan |
| IPR001279 | Domain | Metallo-beta-lactamase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45922 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005847 | Cellular Component | mRNA cleavage and polyadenylation specificity factor complex | Interproscan |
| GO:0006378 | Biological Process | obsolete mRNA polyadenylation | Interproscan |
| GO:0006398 | Biological Process | mRNA 3'-end processing by stem-loop binding and cleavage | Interproscan |
| GO:0098789 | Biological Process | obsolete pre-mRNA cleavage required for polyadenylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14402 | CPSF2, CFT2; cleavage and polyadenylation specificity factor subunit 2 | - | Messenger RNA biogenesis | ko03019 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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