Detailed information of g10745.t1 in Acropora digitifera

Genomic Location: chr5Alt:7430815...7445055
NR annotation: XP_044177194.1, LOW QUALITY PROTEIN: transcription factor SPT20 homolog [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5R724Transcription factor SPT20 homolog OS=Pongo abelii OX=9601 GN=SUPT20H PE=2 SV=1
Q66HC7Transcription factor SPT20 homolog OS=Rattus norvegicus OX=10116 GN=Supt20h PE=2 SV=1
Q7TT00Transcription factor SPT20 homolog OS=Mus musculus OX=10090 GN=Supt20h PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12090
all species →		Spt20_SEPSpt20, SEP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046468
all species →		DomainSpt20-like, SEP domainInterproscan
IPR021950
all species →		FamilyTranscription factor Spt20Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13526
all species →		TRANSCRIPTION FACTOR SPT20 HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000124
all species →		Cellular ComponentSAGA complexInterproscan
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g10745.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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