Gene detail

Detailed information of g1078.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_022791049.1, hippocampus abundant transcript 1 protein-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q96MC6	Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2
P70187	Hippocampus abundant transcript 1 protein OS=Mus musculus OX=10090 GN=Mfsd14a PE=2 SV=3
Q5SR56	Hippocampus abundant transcript-like protein 1 OS=Homo sapiens OX=9606 GN=MFSD14B PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05958	tRNA_U5-meth_tr	tRNA (Uracil-5-)-methyltransferase	Family	Interproscan
PF01284	MARVEL	Membrane-associating domain	Domain	Interproscan
PF03055	RPE65	Retinal pigment epithelial membrane protein	Repeat	Interproscan
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF01565	FAD_binding_4	FAD binding domain	Domain	Interproscan
PF02913	FAD-oxidase_C	FAD linked oxidases, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010280	Family	(Uracil-5)-methyltransferase family	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR030390	Active_site	RNA methyltransferase TrmA, active site	Interproscan
IPR045850	Family	tRNA (uracil(54)-C(5))-methyltransferase, metazoa type	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR050578	Family	MARVEL domain-containing and chemokine-like factor proteins	Interproscan
IPR008253	Domain	Marvel domain	Interproscan
IPR004294	Family	Carotenoid oxygenase	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR005829	Conserved_site	Sugar transporter, conserved site	Interproscan
IPR001958	Family	Tetracycline resistance protein TetA/multidrug resistance protein MdtG-like	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR016166	Domain	FAD-binding domain, PCMH-type	Interproscan
IPR016171	Homologous_superfamily	Vanillyl-alcohol oxidase, C-terminal subdomain 2	Interproscan
IPR016164	Homologous_superfamily	FAD-linked oxidase-like, C-terminal	Interproscan
IPR016167	Homologous_superfamily	FAD-binding, type PCMH, subdomain 1	Interproscan
IPR006094	Domain	FAD linked oxidase, N-terminal	Interproscan
IPR004113	Domain	FAD-binding oxidoreductase/transferase, type 4, C-terminal	Interproscan
IPR016169	Homologous_superfamily	FAD-binding, type PCMH, subdomain 2	Interproscan
IPR025650	Family	Alkyldihydroxyacetonephosphate synthase	Interproscan
IPR036318	Homologous_superfamily	FAD-binding, type PCMH-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45904	TRNA (URACIL-5-)-METHYLTRANSFERASE	Interproscan
PTHR22776	MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN	Interproscan
PTHR10543	BETA-CAROTENE DIOXYGENASE	Interproscan
PTHR23504	MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10	Interproscan
PTHR46568	ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006396	Biological Process	RNA processing	Interproscan
GO:0008173	Molecular Function	RNA methyltransferase activity	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0010436	Molecular Function	carotenoid dioxygenase activity	Interproscan
GO:0016121	Biological Process	carotene catabolic process	Interproscan
GO:0016702	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0005777	Cellular Component	peroxisome	Interproscan
GO:0008609	Molecular Function	alkylglycerone-phosphate synthase activity	Interproscan
GO:0008610	Biological Process	lipid biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00803	AGPS, agpS; alkyldihydroxyacetonephosphate synthase	EC:2.5.1.26	Peroxisome	ko04146	deepkoala