Detailed information of g1093.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_002160112.1, radixin [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35241Radixin OS=Homo sapiens OX=9606 GN=RDX PE=1 SV=1
Q32LP2Radixin OS=Bos taurus OX=9913 GN=RDX PE=2 SV=1
P26044Radixin OS=Sus scrofa OX=9823 GN=RDX PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09414RNA_ligaseRNA ligaseFamilyInterproscan
PF16692Folliculin_CFolliculin C-terminal domainDomainInterproscan
PF11704FolliculinVesicle coat protein involved in Golgi to plasma membrane transportFamilyInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF20492ERM_helicalEzrin/radixin/moesin, alpha-helical domainCoiled-coilInterproscan
PF00769ERM_CEzrin/radixin/moesin family C terminalDomainInterproscan
PF09379FERM_NFERM N-terminal domain DomainInterproscan
PF09380FERM_CFERM C-terminal PH-like domainDomainInterproscan
PF00373FERM_MFERM central domainDomainInterproscan
PF02902Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF06974WS_DGAT_CWS/DGAT C-terminal domainDomainInterproscan
PF03007WS_DGAT_catWax ester synthase/diacylglycerol acyltransferase catalytic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021122DomainRNA ligase domain, REL/Rln2Interproscan
IPR021713FamilyFolliculinInterproscan
IPR037521DomainFolliculin/SMCR8, tripartite DENN domainInterproscan
IPR032035DomainFolliculin, DENN domainInterproscan
IPR037520DomainFolliculin/SMCR8, longin domainInterproscan
IPR044886Homologous_superfamilyFolliculin, DENN domain, C-terminal superfamilyInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR008954Homologous_superfamilyMoesin tail domain superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR046810DomainEzrin/radixin/moesin, alpha-helical domainInterproscan
IPR018980DomainFERM, C-terminal PH-like domainInterproscan
IPR019749DomainBand 4.1 domainInterproscan
IPR011174FamilyEzrin/radixin/moesinInterproscan
IPR019747Conserved_siteFERM conserved siteInterproscan
IPR011259DomainEzrin/radixin/moesin, C-terminalInterproscan
IPR000798FamilyEzrin/radixin/moesin-likeInterproscan
IPR018979DomainFERM, N-terminalInterproscan
IPR019748DomainFERM central domainInterproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR041789DomainERM family, FERM domain C-lobeInterproscan
IPR000299DomainFERM domainInterproscan
IPR035963Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR009721DomainO-acyltransferase WSD1, C-terminalInterproscan
IPR004255DomainO-acyltransferase, WSD1-like, N-terminalInterproscan
IPR045034FamilyO-acyltransferase WSD1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31441FOLLICULIN FAMILY MEMBERInterproscan
PTHR24049CRUMBS FAMILY MEMBERInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR23281MERLIN/MOESIN/EZRIN/RADIXINInterproscan
PTHR34718PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR31650O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0030511Biological Processpositive regulation of transforming growth factor beta receptor signaling pathwayInterproscan
GO:1904263Biological Processpositive regulation of TORC1 signalingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007157Biological Processheterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0032991Cellular Componentprotein-containing complexInterproscan
GO:0045197Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0008360Biological Processregulation of cell shapeInterproscan
GO:0030175Cellular ComponentfilopodiumInterproscan
GO:0045177Cellular Componentapical part of cellInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:1902115Biological Processregulation of organelle assemblyInterproscan
GO:1902966Biological Processpositive regulation of protein localization to early endosomeInterproscan
GO:2000643Biological Processpositive regulation of early endosome to late endosome transportInterproscan
GO:0008092Molecular Functioncytoskeletal protein bindingInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0004144Molecular Functiondiacylglycerol O-acyltransferase activityInterproscan
GO:0045017Biological Processglycerolipid biosynthetic processInterproscan
GO:0008374Molecular FunctionO-acyltransferase activityInterproscan
GO:0019432Biological Processtriglyceride biosynthetic processInterproscan

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