Detailed information of g10960.t1 in Montipora capitata

Genomic Location: Sc0000318:83332...103111
NR annotation: XP_015770376.1, PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Z315U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus OX=10090 GN=Sart1 PE=1 SV=1
Q5XIW8U4/U6.U5 tri-snRNP-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Sart1 PE=1 SV=1
O43290U4/U6.U5 tri-snRNP-associated protein 1 OS=Homo sapiens OX=9606 GN=SART1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004005 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14529
all species →		Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF03045
all species →		DANDAN domainDomainInterproscan
PF03343
all species →		SART-1SART-1 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005135
all species →		DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR029034
all species →		Homologous_superfamilyCystine-knot cytokineInterproscan
IPR004133
all species →		DomainDANInterproscan
IPR036691
all species →		Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005011
all species →		FamilySNU66/SART1 familyInterproscan
IPR006207
all species →		DomainCystine knot, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14152
all species →		SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTESInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000481
all species →		Biological Processmaturation of 5S rRNAInterproscan
GO:0045292
all species →		Biological ProcessmRNA cis splicing, via spliceosomeInterproscan
GO:0046540
all species →		Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g10960.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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