Detailed information of g1098.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_034762288.1, LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 9-like [Acipenser ruthenus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9P2N4A disintegrin and metalloproteinase with thrombospondin motifs 9 OS=Homo sapiens OX=9606 GN=ADAMTS9 PE=1 SV=4
P59511A disintegrin and metalloproteinase with thrombospondin motifs 20 OS=Mus musculus OX=10090 GN=Adamts20 PE=2 SV=2
P59510A disintegrin and metalloproteinase with thrombospondin motifs 20 OS=Homo sapiens OX=9606 GN=ADAMTS20 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06544Prp3_CSmall nuclear ribonucleoprotein Prp3, C-terminal domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF08385DHC_N1Dynein heavy chain, N-terminal region 1FamilyInterproscan
PF08685GONGON domainDomainInterproscan
PF01562Pep_M12B_propepReprolysin family propeptideFamilyInterproscan
PF19030TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01421ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF17771ADAMTS_CR_2ADAMTS cysteine-rich domain 2DomainInterproscan
PF19236ADAMTS_CR_3ADAMTS cysteine-rich domainDomainInterproscan
PF05986ADAMTS_spacer1ADAM-TS Spacer 1DomainInterproscan
PF04563RNA_pol_Rpb2_1RNA polymerase beta subunitFamilyInterproscan
PF04560RNA_pol_Rpb2_7RNA polymerase Rpb2, domain 7DomainInterproscan
PF04561RNA_pol_Rpb2_2RNA polymerase Rpb2, domain 2DomainInterproscan
PF10385RNA_pol_Rpb2_45RNA polymerase beta subunit external 1 domainDomainInterproscan
PF04565RNA_pol_Rpb2_3RNA polymerase Rpb2, domain 3DomainInterproscan
PF00562RNA_pol_Rpb2_6RNA polymerase Rpb2, domain 6DomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006575DomainRWD domainInterproscan
IPR017359FamilyPhomoidride biosynthesis cluster protein F-likeInterproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR010541DomainSmall nuclear ribonucleoprotein Prp3, C-terminal domainInterproscan
IPR050907FamilySerine/Arginine-Rich Splicing FactorInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR013594DomainDynein heavy chain, tailInterproscan
IPR012314DomainPeptidase M12B, GON-ADAMTSsInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR013273FamilyADAMTS/ADAMTS-likeInterproscan
IPR002870DomainPeptidase M12B, propeptideInterproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR041645DomainADAMTS, cysteine-rich domain 2Interproscan
IPR045371DomainADAMTS/ADAMTS-like, cysteine-rich domain 3Interproscan
IPR050439FamilyADAMTS and ADAMTS-likeInterproscan
IPR010294DomainADAMTS/ADAMTS-like, Spacer 1Interproscan
IPR042107Homologous_superfamilyDNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyInterproscan
IPR037034Homologous_superfamilyRNA polymerase Rpb2, domain 2 superfamilyInterproscan
IPR010243FamilyDNA-directed RNA polymerase beta subunit, bacterial-typeInterproscan
IPR007121Conserved_siteRNA polymerase, beta subunit, conserved siteInterproscan
IPR015712FamilyDNA-directed RNA polymerase, subunit 2Interproscan
IPR037033Homologous_superfamilyDNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyInterproscan
IPR007644DomainRNA polymerase, beta subunit, protrusionInterproscan
IPR007641DomainRNA polymerase Rpb2, domain 7Interproscan
IPR007642DomainRNA polymerase Rpb2, domain 2Interproscan
IPR014724Homologous_superfamilyRNA polymerase Rpb2, OB-foldInterproscan
IPR019462DomainDNA-directed RNA polymerase, beta subunit, external 1 domainInterproscan
IPR007645DomainRNA polymerase Rpb2, domain 3Interproscan
IPR007120DomainDNA-directed RNA polymerase, subunit 2, hybrid-binding domainInterproscan
IPR023214Homologous_superfamilyHAD superfamilyInterproscan
IPR001757FamilyP-type ATPaseInterproscan
IPR036412Homologous_superfamilyHAD-like superfamilyInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15955RWD DOMAIN CONTAINING PROTEIN 2Interproscan
PTHR23147SERINE/ARGININE RICH SPLICING FACTORInterproscan
PTHR46532MALE FERTILITY FACTOR KL5Interproscan
PTHR13723ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan
PTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2Interproscan
PTHR42861CALCIUM-TRANSPORTING ATPASEInterproscan
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0016607Cellular Componentnuclear speckInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005858Cellular Componentaxonemal dynein complexInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0032549Molecular Functionribonucleoside bindingInterproscan
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0005388Molecular FunctionP-type calcium transporter activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006828Biological Processmanganese ion transportInterproscan
GO:0006874Biological Processintracellular calcium ion homeostasisInterproscan
GO:0015662Molecular FunctionP-type ion transporter activityInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0005215Molecular Functiontransporter activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03043rpoB; DNA-directed RNA polymerase subunit betaEC:2.7.7.6
Peptidases and inhibitorsko01002deepkoala
DNA repair and recombination proteinsko03400deepkoala

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