Detailed information of g1099.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047122540.1, uncharacterized protein LOC101234523 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6ZV73FYVE, RhoGEF and PH domain-containing protein 6 OS=Homo sapiens OX=9606 GN=FGD6 PE=1 SV=2
Q69ZL1FYVE, RhoGEF and PH domain-containing protein 6 OS=Mus musculus OX=10090 GN=Fgd6 PE=1 SV=2
Q91ZT5FYVE, RhoGEF and PH domain-containing protein 4 OS=Mus musculus OX=10090 GN=Fgd4 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04998RNA_pol_Rpb1_5RNA polymerase Rpb1, domain 5DomainInterproscan
PF00623RNA_pol_Rpb1_2RNA polymerase Rpb1, domain 2DomainInterproscan
PF04997RNA_pol_Rpb1_1RNA polymerase Rpb1, domain 1DomainInterproscan
PF04983RNA_pol_Rpb1_3RNA polymerase Rpb1, domain 3DomainInterproscan
PF05000RNA_pol_Rpb1_4RNA polymerase Rpb1, domain 4DomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF13202EF-hand_5EF handDomainInterproscan
PF00664ABC_membraneABC transporter transmembrane regionFamilyInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF01363FYVEFYVE zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026204FamilyGRIP1-associated protein 1Interproscan
IPR038120Homologous_superfamilyRNA polymerase Rpb1, funnel domain superfamilyInterproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR007081DomainRNA polymerase Rpb1, domain 5Interproscan
IPR006592DomainRNA polymerase, N-terminalInterproscan
IPR042102Homologous_superfamilyRNA polymerase Rpb1, domain 3 superfamilyInterproscan
IPR012754FamilyDNA-directed RNA polymerase, subunit beta-prime, bacterial typeInterproscan
IPR000722DomainRNA polymerase, alpha subunitInterproscan
IPR007080DomainRNA polymerase Rpb1, domain 1Interproscan
IPR044893Homologous_superfamilyRNA polymerase Rpb1, clamp domain superfamilyInterproscan
IPR007066DomainRNA polymerase Rpb1, domain 3Interproscan
IPR007083DomainRNA polymerase Rpb1, domain 4Interproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR039421FamilyType 1 protein exporterInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR017455DomainZinc finger, FYVE-relatedInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR051092FamilyFYVE, RhoGEF and PH domain-containingInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR000306DomainFYVE zinc fingerInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18978GRIP-1 ASSOCIATED PROTEIN 1Interproscan
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan
PTHR24222ABC TRANSPORTER B FAMILYInterproscan
PTHR12673FACIOGENITAL DYSPLASIA PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0098837Cellular Componentpostsynaptic recycling endosomeInterproscan
GO:0098887Biological Processneurotransmitter receptor transport, endosome to postsynaptic membraneInterproscan
GO:0098978Cellular Componentglutamatergic synapseInterproscan
GO:0098998Cellular Componentextrinsic component of postsynaptic early endosome membraneInterproscan
GO:0099152Biological Processregulation of neurotransmitter receptor transport, endosome to postsynaptic membraneInterproscan
GO:0099158Biological Processregulation of recycling endosome localization within postsynapseInterproscan
GO:1905244Biological Processregulation of modification of synaptic structureInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005089Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03046rpoC; DNA-directed RNA polymerase subunit beta'EC:2.7.7.6
Domain-containing proteins not elsewhere classifiedko04990deepkoala
CD moleculesko04090deepkoala
Membrane traffickingko04131deepkoala
DNA repair and recombination proteinsko03400deepkoala

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