Detailed information of g11.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: ERI95394.1, hypothetical protein HMPREF1982_00259 [Clostridiales bacterium oral taxon 876 str. F0540]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5JT25Ras-related protein Rab-41 OS=Homo sapiens OX=9606 GN=RAB41 PE=1 SV=2
P36017Vacuolar protein sorting-associated protein 21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VPS21 PE=1 SV=1
Q40521Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Transcription Factors FamilyMH1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01863YgjP-likeYgjP-like, metallopeptidase domainFamilyInterproscan
PF03165MH1MH1 domainDomainInterproscan
PF03166MH2MH2 domainFamilyInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF104171-cysPrx_CC-terminal domain of 1-Cys peroxiredoxinDomainInterproscan
PF00578AhpC-TSAAhpC/TSA familyDomainInterproscan
PF00071RasRas familyDomainInterproscan
PF16189Creatinase_N_2Creatinase/Prolidase N-terminal domainDomainInterproscan
PF01423LSMLSM domain DomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF00149MetallophosCalcineurin-like phosphoesteraseDomainInterproscan
PF16656Pur_ac_phosph_NPurple acid Phosphatase, N-terminal domainDomainInterproscan
PF16206Mon2_CC-terminal region of Mon2 proteinFamilyInterproscan
PF09324Sec7-like_HDSMon2/Sec7/BIG1-like, HDSDomainInterproscan
PF16213DCBMon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domainDomainInterproscan
PF12783Sec7-like_HUSMon2/Sec7/BIG1-like, HUS domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002725DomainYgjP-like, metallopeptidase domainInterproscan
IPR053136FamilyUTP pyrophosphatase-likeInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR001132DomainSMAD domain, Dwarfin-typeInterproscan
IPR036578Homologous_superfamilySMAD MH1 domain superfamilyInterproscan
IPR017855Homologous_superfamilySMAD-like domain superfamilyInterproscan
IPR013019DomainMAD homology, MH1Interproscan
IPR013790FamilyDwarfinInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013766DomainThioredoxin domainInterproscan
IPR019479DomainPeroxiredoxin, C-terminalInterproscan
IPR050217FamilyThiol-specific antioxidant peroxiredoxinInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR000866DomainAlkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantInterproscan
IPR050227FamilyRas-related protein RabInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR050422FamilyXaa-Pro aminopeptidase PInterproscan
IPR029149Homologous_superfamilyCreatinase/Aminopeptidase P/Spt16, N-terminalInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR044641FamilySm-like protein Lsm7/SmGInterproscan
IPR047575DomainSm domainInterproscan
IPR017132FamilySm-like protein Lsm7Interproscan
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR029052Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan
IPR041792DomainPurple acid phosphatase, metallophosphatase domainInterproscan
IPR008963Homologous_superfamilyPurple acid phosphatase-like, N-terminalInterproscan
IPR004843DomainCalcineurin-like phosphoesterase domain, ApaH typeInterproscan
IPR015914DomainPurple acid phosphatase, N-terminalInterproscan
IPR032817DomainMon2, C-terminalInterproscan
IPR015403DomainMon2/Sec7/BIG1-like, HDSInterproscan
IPR032629DomainMon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domainInterproscan
IPR032691DomainMon2/Sec7/BIG1-like, HUS domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30399UNCHARACTERIZED PROTEIN YGJPInterproscan
PTHR13703SMADInterproscan
PTHR10681THIOREDOXIN PEROXIDASEInterproscan
PTHR47977RAS-RELATED PROTEIN RABInterproscan
PTHR43763XAA-PRO AMINOPEPTIDASE 1Interproscan
PTHR10553SMALL NUCLEAR RIBONUCLEOPROTEINInterproscan
PTHR23235KRUEPPEL-LIKE TRANSCRIPTION FACTORInterproscan
PTHR45778PURPLE ACID PHOSPHATASE-RELATEDInterproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10663GUANYL-NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007179Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0060395Biological ProcessSMAD protein signal transductionInterproscan
GO:0070411Molecular FunctionI-SMAD bindingInterproscan
GO:0071144Cellular Componentheteromeric SMAD protein complexInterproscan
GO:0140416Molecular Functiontranscription regulator inhibitor activityInterproscan
GO:0051920Molecular Functionperoxiredoxin activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006979Biological Processresponse to oxidative stressInterproscan
GO:0008379Molecular Functionthioredoxin peroxidase activityInterproscan
GO:0033554Biological Processcellular response to stressInterproscan
GO:0042744Biological Processhydrogen peroxide catabolic processInterproscan
GO:0045454Biological Processcell redox homeostasisInterproscan
GO:0016209Molecular Functionantioxidant activityInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005688Cellular ComponentU6 snRNPInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0097526Cellular Componentspliceosomal tri-snRNP complexInterproscan
GO:1990726Cellular ComponentLsm1-7-Pat1 complexInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000956Biological Processnuclear-transcribed mRNA catabolic processInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003993Molecular Functionacid phosphatase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12626LSM7; U6 snRNA-associated Sm-like protein LSm7-Domain-containing proteins not elsewhere classifiedko04990deepkoala
Membrane traffickingko04131deepkoala
Exosomeko04147deepkoala
Transcription factorsko03000deepkoala
Spliceosomeko03041deepkoala

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