Detailed information of g110.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBN1409645.1, hypothetical protein [Spirochaetales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9UPX8SH3 and multiple ankyrin repeat domains protein 2 OS=Homo sapiens OX=9606 GN=SHANK2 PE=1 SV=4
Q9BYB0SH3 and multiple ankyrin repeat domains protein 3 OS=Homo sapiens OX=9606 GN=SHANK3 PE=1 SV=4
Q4ACU6SH3 and multiple ankyrin repeat domains protein 3 OS=Mus musculus OX=10090 GN=Shank3 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF07653SH3_2Variant SH3 domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF03279Lip_A_acyltransBacterial lipid A biosynthesis acyltransferaseFamilyInterproscan
PF17903KH_8Krr1 KH1 domainDomainInterproscan
PF21800KRR1-like_KH2KRR1 small subunit processome component, second KH domainDomainInterproscan
PF00615RGSRegulator of G protein signaling domainDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF01434Peptidase_M41Peptidase family M41DomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan
PF02151UVRUvrB/uvrC motifFamilyInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF04851ResIIIType III restriction enzyme, res subunitFamilyInterproscan
PF17757UvrB_interUvrB interaction domainDomainInterproscan
PF12344UvrBUltra-violet resistance protein BFamilyInterproscan
PF01208URO-DUroporphyrinogen decarboxylase (URO-D)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR001478DomainPDZ domainInterproscan
IPR001452DomainSH3 domainInterproscan
IPR051569FamilySH3 and multiple ankyrin repeat domains proteinInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR004960FamilyBacterial lipid A biosynthesis acyltransferaseInterproscan
IPR053226FamilyPyrrolopyrazine Biosynthesis Cluster Protein FInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR048549DomainKRR1 small subunit processome component, second KH domain, eukaryotesInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR041174DomainKRR1 small subunit processome component, first KH domainInterproscan
IPR048548DomainKRR1 small subunit processome component, second KH domainInterproscan
IPR024166FamilyRibosomal RNA assembly KRR1Interproscan
IPR048550DomainKRR1 small subunit processome component, first KH domain, eukaryotesInterproscan
IPR016137DomainRGS domainInterproscan
IPR000961DomainAGC-kinase, C-terminalInterproscan
IPR044926Homologous_superfamilyRGS, subdomain 2Interproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR000239FamilyGPCR kinaseInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR036305Homologous_superfamilyRGS domain superfamilyInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR005936FamilyATP-dependent zinc metalloprotease, FtsHInterproscan
IPR037219Homologous_superfamilyPeptidase M41-likeInterproscan
IPR000642DomainPeptidase M41Interproscan
IPR003960Conserved_siteATPase, AAA-type, conserved siteInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR001943DomainUVR domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR004807FamilyUvrABC system, subunit BInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR006935DomainHelicase/UvrB, N-terminalInterproscan
IPR041471DomainUvrB, interaction domainInterproscan
IPR036876Homologous_superfamilyUVR domain superfamilyInterproscan
IPR024759DomainUvrB, YAD/RRR-motif-containing domainInterproscan
IPR000591DomainDEP domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR000257DomainUroporphyrinogen decarboxylase (URO-D)Interproscan
IPR006361FamilyUroporphyrinogen decarboxylase HemEInterproscan
IPR038071Homologous_superfamilyUROD/MetE-like superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24135SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEINInterproscan
PTHR30606LIPID A BIOSYNTHESIS LAUROYL ACYLTRANSFERASEInterproscan
PTHR48331SULFOTRANSFERASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12581HIV-1 REV BINDING PROTEIN 2, 3Interproscan
PTHR24355G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASEInterproscan
PTHR23076METALLOPROTEASE M41 FTSHInterproscan
PTHR24029UVRABC SYSTEM PROTEIN BInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21091METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030160Molecular Functionsynaptic receptor adaptor activityInterproscan
GO:0035255Molecular Functionionotropic glutamate receptor bindingInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0004703Molecular FunctionG protein-coupled receptor kinase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0009966Biological Processregulation of signal transductionInterproscan
GO:0004176Molecular FunctionATP-dependent peptidase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030163Biological Processprotein catabolic processInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0009380Cellular Componentexcinuclease repair complexInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0004853Molecular Functionuroporphyrinogen decarboxylase activityInterproscan
GO:0006779Biological Processporphyrin-containing compound biosynthetic processInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006783Biological Processheme biosynthetic processInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01599hemE, UROD; uroporphyrinogen decarboxylaseEC:4.1.1.37
Glutamatergic synapseko04724deepkoala
Chaperones and folding catalystsko03110deepkoala
Protein kinasesko01001deepkoala
Messenger RNA biogenesisko03019deepkoala
DNA repair and recombination proteinsko03400deepkoala
Porphyrin metabolismko00860deepkoala

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