Detailed information of g1100.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KFM75205.1, Transposable element P transposase, partial [Stegodyphus mimosarum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8BH60Golgi-associated PDZ and coiled-coil motif-containing protein OS=Mus musculus OX=10090 GN=Gopc PE=1 SV=1
Q9HD26Golgi-associated PDZ and coiled-coil motif-containing protein OS=Homo sapiens OX=9606 GN=GOPC PE=1 SV=1
Q5RD32Golgi-associated PDZ and coiled-coil motif-containing protein OS=Pongo abelii OX=9601 GN=GOPC PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyTHAP
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01775Ribosomal_L18ARibosomal proteins 50S-L18Ae/60S-L20/60S-L18ADomainInterproscan
PF06337DUSPDUSP domainDomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF21788TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan
PF21787TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF00582UspUniversal stress protein familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021138FamilyLarge ribosomal subunit protein eL20, eukaryotesInterproscan
IPR023573DomainLarge ribosomal subunit protein eL20 domainInterproscan
IPR028877FamilyLarge ribosomal subunit protein eL20Interproscan
IPR006615DomainPeptidase C19, ubiquitin-specific peptidase, DUSP domainInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR035927Homologous_superfamilyDUSP-like superfamilyInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR001478DomainPDZ domainInterproscan
IPR038879FamilyGolgi-associated PDZ and coiled-coil motif-containing proteinInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR048366DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan
IPR048365DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR006015FamilyUniversal stress protein A familyInterproscan
IPR006016DomainUspAInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR1005260S RIBOSOMAL PROTEIN L18AInterproscan
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan
PTHR21559DYSTROGLYCAN-RELATEDInterproscan
PTHR16528GOLGI-ASSOCIATED PDZ AND COILED-COIL MOTIF-CONTAININGInterproscan
PTHR47577THAP DOMAIN-CONTAINING PROTEIN 6Interproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR46989USP DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0002009Biological Processmorphogenesis of an epitheliumInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0016011Cellular Componentdystroglycan complexInterproscan
GO:0016203Biological Processmuscle attachmentInterproscan
GO:0021675Biological Processnerve developmentInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0043236Molecular Functionlaminin bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0030140Cellular Componenttrans-Golgi network transport vesicleInterproscan
GO:0043004Biological Processobsolete cytoplasmic sequestering of CFTR proteinInterproscan
GO:0044325Molecular Functiontransmembrane transporter bindingInterproscan
GO:2000009Biological Processnegative regulation of protein localization to cell surfaceInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05312CHRNN; nicotinic acetylcholine receptor, invertebrate-Domain-containing proteins not elsewhere classifiedko04990deepkoala
Ribosomeko03011deepkoala
Ubiquitin systemko04121deepkoala
Ion channelsko04040deepkoala

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