Gene detail

Detailed information of g1102.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_010217307.1, PREDICTED: glucosylceramidase [Tinamus guttatus]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P17439	Lysosomal acid glucosylceramidase OS=Mus musculus OX=10090 GN=Gba1 PE=1 SV=1
Q70KH2	Lysosomal acid glucosylceramidase OS=Sus scrofa OX=9823 GN=GBA1 PE=3 SV=1
Q2KHZ8	Lysosomal acid glucosylceramidase OS=Bos taurus OX=9913 GN=GBA1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000008 (this species only)
Orthogroup (gene family)	OG0000038 (this species only)
Orthogroup (gene family)	OG0000055 (this species only)
Orthogroup (gene family)	OG0000089 (this species only)
Orthogroup (gene family)	OG0000171 (this species only)
Orthogroup (gene family)	OG0000191 (this species only)
Orthogroup (gene family)	OG0001018 (this species only)
Orthogroup (gene family)	OG0003715 (this species only)
Orthogroup (gene family)	OG0003972 (this species only)
Orthogroup (gene family)	OG0004227 (this species only)
Orthogroup (gene family)	OG0007172 (this species only)
Orthogroup (gene family)	OG0008535 (this species only)
Orthogroup (gene family)	OG0008779 (this species only)
Orthogroup (gene family)	OG0059687 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13517 all species →	FG-GAP_3	FG-GAP-like repeat	Repeat	Interproscan
PF00067 all species →	p450	Cytochrome P450	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF13359 all species →	DDE_Tnp_4	DDE superfamily endonuclease	Domain	Interproscan
PF17189 all species →	Glyco_hydro_30C	Glycosyl hydrolase family 30 beta sandwich domain	Domain	Interproscan
PF02055 all species →	Glyco_hydro_30	Glycosyl hydrolase family 30 TIM-barrel domain	Domain	Interproscan
PF00731 all species →	AIRC	AIR carboxylase	Domain	Interproscan
PF01259 all species →	SAICAR_synt	SAICAR synthetase	Family	Interproscan
PF04908 all species →	SH3BGR	SH3-binding, glutamic acid-rich protein	Family	Interproscan
PF09588 all species →	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan
PF09412 all species →	XendoU	Endoribonuclease XendoU	Family	Interproscan
PF09138 all species →	Urm1	Urm1 (Ubiquitin related modifier)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028994 all species →	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR013517 all species →	Repeat	FG-GAP repeat	Interproscan
IPR001128 all species →	Family	Cytochrome P450	Interproscan
IPR002401 all species →	Family	Cytochrome P450, E-class, group I	Interproscan
IPR036396 all species →	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR052510 all species →	Family	Oomycete RxLR Effector	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050379 all species →	Family	Type I Cytokine Receptor	Interproscan
IPR027806 all species →	Domain	Harbinger transposase-derived nuclease domain	Interproscan
IPR033452 all species →	Domain	Glycosyl hydrolase family 30, beta sandwich domain	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR001139 all species →	Family	Glycoside hydrolase family 30	Interproscan
IPR033453 all species →	Domain	Glycosyl hydrolase family 30, TIM-barrel domain	Interproscan
IPR013780 all species →	Homologous_superfamily	Glycosyl hydrolase, all-beta	Interproscan
IPR000031 all species →	Domain	PurE domain	Interproscan
IPR018236 all species →	Conserved_site	SAICAR synthetase, conserved site	Interproscan
IPR028923 all species →	Domain	SAICAR synthetase/ADE2, N-terminal	Interproscan
IPR033626 all species →	Domain	Class II PurE	Interproscan
IPR050089 all species →	Family	SAICAR synthetase	Interproscan
IPR051033 all species →	Family	SH3 domain-binding glutamic acid-rich protein	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR006993 all species →	Family	SH3-binding, glutamic acid-rich protein	Interproscan
IPR036361 all species →	Homologous_superfamily	SAP domain superfamily	Interproscan
IPR003034 all species →	Domain	SAP domain	Interproscan
IPR019080 all species →	Domain	YqaJ viral recombinase	Interproscan
IPR011604 all species →	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR007527 all species →	Domain	Zinc finger, SWIM-type	Interproscan
IPR011335 all species →	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR001965 all species →	Domain	Zinc finger, PHD-type	Interproscan
IPR018998 all species →	Domain	EndoU ribonuclease, C-terminal	Interproscan
IPR039787 all species →	Family	Poly(U)-specific endoribonuclease	Interproscan
IPR037227 all species →	Homologous_superfamily	Endoribonuclease EndoU-like	Interproscan
IPR015221 all species →	Family	Ubiquitin-related modifier 1	Interproscan
IPR016155 all species →	Homologous_superfamily	Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp	Interproscan
IPR012675 all species →	Homologous_superfamily	Beta-grasp domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46580 all species →	SENSOR KINASE-RELATED	Interproscan
PTHR24289 all species →	STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE	Interproscan
PTHR45895 all species →	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR23036 all species →	CYTOKINE RECEPTOR	Interproscan
PTHR23080 all species →	THAP DOMAIN PROTEIN	Interproscan
PTHR11069 all species →	GLUCOSYLCERAMIDASE	Interproscan
PTHR43599 all species →	MULTIFUNCTIONAL PROTEIN ADE2	Interproscan
PTHR12232 all species →	SH3 DOMAIN-BINDING GLUTAMIC ACID-RICH-LIKE PROTEIN	Interproscan
PTHR47526 all species →	ATP-DEPENDENT DNA HELICASE	Interproscan
PTHR12439 all species →	PLACENTAL PROTEIN 11-RELATED	Interproscan
PTHR33244 all species →	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR14986 all species →	RURM1 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004896 all species →	Molecular Function	cytokine receptor activity	Interproscan
GO:0009897 all species →	Cellular Component	external side of plasma membrane	Interproscan
GO:0019221 all species →	Biological Process	cytokine-mediated signaling pathway	Interproscan
GO:0019955 all species →	Molecular Function	cytokine binding	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0004348 all species →	Molecular Function	glucosylceramidase activity	Interproscan
GO:0006665 all species →	Biological Process	sphingolipid metabolic process	Interproscan
GO:0006680 all species →	Biological Process	glucosylceramide catabolic process	Interproscan
GO:0006189 all species →	Biological Process	'de novo' IMP biosynthetic process	Interproscan
GO:0004639 all species →	Molecular Function	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity	Interproscan
GO:0006164 all species →	Biological Process	purine nucleotide biosynthetic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0004521 all species →	Molecular Function	RNA endonuclease activity	Interproscan
GO:0034227 all species →	Biological Process	tRNA thio-modification	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0031386 all species →	Molecular Function	protein tag activity	Interproscan
GO:0032447 all species →	Biological Process	protein urmylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12161	URM1; ubiquitin related modifier 1	-	Ubiquitin system	ko04121	deepkoala
K14648	ENDOU, PP11; poly(U)-specific endoribonuclease	EC:3.1.-.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.