Detailed information of g1103.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAJ7365940.1, Ganglioside GM2 activator [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q60648Ganglioside GM2 activator OS=Mus musculus OX=10090 GN=Gm2a PE=1 SV=2
P35433Amidophosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Ppat PE=1 SV=1
Q06203Amidophosphoribosyltransferase OS=Homo sapiens OX=9606 GN=PPAT PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05018CFA20_domCFA20 domainDomainInterproscan
PF09588YqaJYqaJ-like viral recombinase domainDomainInterproscan
PF19282Exportin-TExportin-TFamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF13613HTH_Tnp_4Helix-turn-helix of DDE superfamily endonucleaseDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF12937F-box-likeF-box-likeDomainInterproscan
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF13522GATase_6Glutamine amidotransferase domainDomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040441FamilyCilia- and flagella-associated protein 20/CFAP20DCInterproscan
IPR007714DomainCFA20 domainInterproscan
IPR019080DomainYqaJ viral recombinaseInterproscan
IPR051703FamilyNF-kappa-B Signaling RegulatorInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR011604Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan
IPR045546DomainExportin-T, C-terminal domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR040017FamilyExportin-TInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR027805DomainTransposase, Helix-turn-helix domainInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR029703FamilyDNA polymerase epsilon catalytic subunitInterproscan
IPR042087Homologous_superfamilyDNA polymerase family B, thumb domainInterproscan
IPR001810DomainF-box domainInterproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR005854FamilyAmidophosphoribosyltransferaseInterproscan
IPR029055Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR029057Homologous_superfamilyPhosphoribosyltransferase-likeInterproscan
IPR000836DomainPhosphoribosyltransferase domainInterproscan
IPR035584DomainAmidophosphoribosyltransferase, N-terminalInterproscan
IPR017932DomainGlutamine amidotransferase type 2 domainInterproscan
IPR028996FamilyGanglioside GM2 activatorInterproscan
IPR036846Homologous_superfamilyGM2-AP, lipid-recognition domain superfamilyInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12458ORF PROTEINInterproscan
PTHR46609EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEINInterproscan
PTHR15952EXPORTIN-T/LOS1Interproscan
PTHR23080THAP DOMAIN PROTEINInterproscan
PTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT AInterproscan
PTHR13318UNCHARACTERIZEDInterproscan
PTHR11907AMIDOPHOSPHORIBOSYLTRANSFERASEInterproscan
PTHR17357GM2 GANGLIOSIDE ACTIVATOR PROTEINInterproscan
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0031514Cellular Componentmotile ciliumInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0060296Biological Processregulation of cilium beat frequency involved in ciliary motilityInterproscan
GO:2000147Biological Processpositive regulation of cell motilityInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006409Biological ProcesstRNA export from nucleusInterproscan
GO:0016363Cellular Componentnuclear matrixInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0071528Biological ProcesstRNA re-export from nucleusInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006272Biological Processleading strand elongationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006287Biological Processbase-excision repair, gap-fillingInterproscan
GO:0006297Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0008310Molecular Functionsingle-stranded DNA 3'-5' DNA exonuclease activityInterproscan
GO:0008622Cellular Componentepsilon DNA polymerase complexInterproscan
GO:0045004Biological ProcessDNA replication proofreadingInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004044Molecular Functionamidophosphoribosyltransferase activityInterproscan
GO:0009113Biological Processpurine nucleobase biosynthetic processInterproscan
GO:0006164Biological Processpurine nucleotide biosynthetic processInterproscan
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0006689Biological Processganglioside catabolic processInterproscan
GO:0006869Biological Processlipid transportInterproscan
GO:0008047Molecular Functionenzyme activator activityInterproscan
GO:0009898Cellular Componentcytoplasmic side of plasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25470CFAP20; cilia- and flagella-associated protein 20-G protein-coupled receptorsko04030deepkoala
Cilium and associated proteinsko03037deepkoala

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