Detailed information of g11046.t1 in Acropora digitifera

Genomic Location: chr5Alt:11223292...11257483
NR annotation: CAH3046881.1, unnamed protein product [Porites lobata]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
M9NDE3Protein bark beetle OS=Drosophila melanogaster OX=7227 GN=bark PE=1 SV=1
A1L4H1Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D OS=Homo sapiens OX=9606 GN=SSC5D PE=1 SV=3
Q60997Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Mus musculus OX=10090 GN=Dmbt1 PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13229
all species →		Beta_helixRight handed beta helix regionRepeatInterproscan
PF00530
all species →		SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00629
all species →		MAMMAM domain, meprin/A5/muDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036772
all species →		Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR001190
all species →		DomainSRCR domainInterproscan
IPR039448
all species →		DomainRight handed beta helix domainInterproscan
IPR053243
all species →		FamilySeptate junction maturation regulatorInterproscan
IPR011050
all species →		Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR000998
all species →		DomainMAM domainInterproscan
IPR012334
all species →		Homologous_superfamilyPectin lyase foldInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR017448
all species →		DomainSRCR-like domainInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR006626
all species →		RepeatParallel beta-helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47653
all species →		PROTEIN BARK BEETLEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g11046.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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