Detailed information of g1106.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_028392873.1, radial spoke head 10 homolog B-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B2RC85Radial spoke head 10 homolog B2 OS=Homo sapiens OX=9606 GN=RSPH10B2 PE=1 SV=2
P0C881Radial spoke head 10 homolog B OS=Homo sapiens OX=9606 GN=RSPH10B PE=2 SV=1
A7SFP1Leucine-rich repeat protein soc-2 homolog OS=Nematostella vectensis OX=45351 GN=v1g189306 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02801Ketoacyl-synt_CBeta-ketoacyl synthase, C-terminal domainDomainInterproscan
PF00071RasRas familyDomainInterproscan
PF02493MORNMORN repeatRepeatInterproscan
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan
PF13193AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan
PF19745FUT8_N_catAlpha-(1,6)-fucosyltransferase N- and catalytic domainsDomainInterproscan
PF13837Myb_DNA-bind_4Myb/SANT-like DNA-binding domainDomainInterproscan
PF12371TMEM131_like_NTransmembrane protein 131-like N-terminalDomainInterproscan
PF19532TMEM131_likeTransmembrane protein 131-likeFamilyInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020841DomainPolyketide synthase, beta-ketoacyl synthase domainInterproscan
IPR000794FamilyBeta-ketoacyl synthaseInterproscan
IPR016039Homologous_superfamilyThiolase-likeInterproscan
IPR047224DomainFatty acid synthase subunit alpha-like, C-terminalInterproscan
IPR014031DomainBeta-ketoacyl synthase, C-terminalInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003409RepeatMORN repeatInterproscan
IPR020845Conserved_siteAMP-binding, conserved siteInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR045851Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan
IPR025110DomainAMP-binding enzyme, C-terminal domainInterproscan
IPR045573DomainAlpha-(1,6)-fucosyltransferase, N- and catalytic domainInterproscan
IPR027350DomainGlycosyltransferase family 23 (GT23) domainInterproscan
IPR050249FamilyPseudomonas-type Homoserine KinaseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR029865FamilyDyslexia-associated protein KIAA0319-likeInterproscan
IPR044822DomainMyb/SANT-like DNA-binding domain 4Interproscan
IPR039877FamilyTransmembrane protein 131-likeInterproscan
IPR022113DomainTransmembrane protein 131-like, N-terminalInterproscan
IPR045695DomainTransmembrane protein 131-like, conserved domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11712POLYKETIDE SYNTHASE-RELATEDInterproscan
PTHR47981RAB FAMILYInterproscan
PTHR46613RADIAL SPOKE HEAD 10 HOMOLOG B-RELATEDInterproscan
PTHR43107LONG-CHAIN FATTY ACID TRANSPORT PROTEINInterproscan
PTHR13132ALPHA- 1,6 -FUCOSYLTRANSFERASEInterproscan
PTHR21064UNCHARACTERIZEDInterproscan
PTHR46791EXPRESSED PROTEINInterproscan
PTHR46182FI19480P1Interproscan
PTHR22050RW1 PROTEIN HOMOLOGInterproscan
PTHR48051-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004315Molecular Function3-oxoacyl-[acyl-carrier-protein] synthase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006633Biological Processfatty acid biosynthetic processInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0005770Cellular Componentlate endosomeInterproscan
GO:0008333Biological Processendosome to lysosome transportInterproscan
GO:0045335Cellular Componentphagocytic vesicleInterproscan
GO:0090385Biological Processphagosome-lysosome fusionInterproscan
GO:0004467Molecular Functionlong-chain fatty acid-CoA ligase activityInterproscan
GO:0005324Molecular Functionlong-chain fatty acid transmembrane transporter activityInterproscan
GO:0006487Biological Processprotein N-linked glycosylationInterproscan
GO:0036071Biological ProcessN-glycan fucosylationInterproscan
GO:0046921Molecular Functionalpha-(1->6)-fucosyltransferase activityInterproscan
GO:0019202Molecular Functionamino acid kinase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0001764Biological Processneuron migrationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19613SHOC2, SUR8; leucine-rich repeat protein SHOC2-Cilium and associated proteinsko03037deepkoala
Ras signaling pathwayko04014deepkoala

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