Detailed information of g1107.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_032220302.1, DNA repair-scaffolding protein isoform X5 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9BQ67Glutamate-rich WD repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=GRWD1 PE=1 SV=1
Q1JQD2Glutamate-rich WD repeat-containing protein 1 OS=Bos taurus OX=9913 GN=GRWD1 PE=2 SV=1
Q810D6Glutamate-rich WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Grwd1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00743FMO-likeFlavin-binding monooxygenase-likeFamilyInterproscan
PF01251Ribosomal_S7eRibosomal protein S7eFamilyInterproscan
PF01008IF-2BInitiation factor 2 subunit familyFamilyInterproscan
PF19745FUT8_N_catAlpha-(1,6)-fucosyltransferase N- and catalytic domainsDomainInterproscan
PF02221E1_DerP2_DerF2ML domainDomainInterproscan
PF13847Methyltransf_31Methyltransferase domainDomainInterproscan
PF12265CAF1C_H4-bdHistone-binding protein RBBP4 or subunit C of CAF1 complexRepeatInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR050346FamilyFlavin-containing MonooxygenasesInterproscan
IPR020946FamilyFlavin monooxygenase-likeInterproscan
IPR000554FamilySmall ribosomal subunit protein eS7Interproscan
IPR047861Conserved_siteSmall ribosomal subunit protein eS7, conserved siteInterproscan
IPR000649FamilyInitiation factor 2B-relatedInterproscan
IPR037171Homologous_superfamilyNagB/RpiA transferase-likeInterproscan
IPR042529Homologous_superfamilyInitiation factor 2B-like, C-terminalInterproscan
IPR045573DomainAlpha-(1,6)-fucosyltransferase, N- and catalytic domainInterproscan
IPR027350DomainGlycosyltransferase family 23 (GT23) domainInterproscan
IPR053054FamilyDNA repair-scaffolding proteinInterproscan
IPR039670FamilySterol transport protein NPC2-likeInterproscan
IPR003172DomainMD-2-related lipid-recognition domainInterproscan
IPR033916DomainNpc2 like, ML domainInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR025714DomainMethyltransferase domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR022052DomainHistone-binding protein RBBP4, N-terminalInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR051972FamilyGlutamate-rich WD repeat-containingInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23023DIMETHYLANILINE MONOOXYGENASEInterproscan
PTHR1127840S RIBOSOMAL PROTEIN S7Interproscan
PTHR10233TRANSLATION INITIATION FACTOR EIF-2BInterproscan
PTHR13132ALPHA- 1,6 -FUCOSYLTRANSFERASEInterproscan
PTHR34347DNA REPAIR-SCAFFOLDING PROTEIN SPIDRInterproscan
PTHR11306NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATEDInterproscan
PTHR45903GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004499Molecular FunctionN,N-dimethylaniline monooxygenase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0042274Biological Processribosomal small subunit biogenesisInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan
GO:0006487Biological Processprotein N-linked glycosylationInterproscan
GO:0036071Biological ProcessN-glycan fucosylationInterproscan
GO:0046921Molecular Functionalpha-(1->6)-fucosyltransferase activityInterproscan
GO:0000228Cellular Componentnuclear chromosomeInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0070202Biological Processregulation of establishment of protein localization to chromosomeInterproscan
GO:0015918Biological Processsterol transportInterproscan
GO:0032934Molecular Functionsterol bindingInterproscan
GO:0032367Biological Processintracellular cholesterol transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02993RP-S7e, RPS7; small subunit ribosomal protein S7e-Ribosome biogenesisko03009deepkoala
Translation factorsko03012deepkoala
Transportersko02000deepkoala
Ribosomeko03011deepkoala

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