Detailed information of g1109.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_032171519.1, ubiquitin-conjugating enzyme E2 variant 2 isoform X1 [Mustela erminea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3SZ43Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos taurus OX=9913 GN=UBE2V2 PE=2 SV=3
Q15819Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo sapiens OX=9606 GN=UBE2V2 PE=1 SV=4
Q5R6C9Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo abelii OX=9601 GN=UBE2V2 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE2|UBC|UBC
Ubiquitin FamilyUBD|UBC-like|UBC
Ubiquitin FamilyUBD|UBC-like|UEV
Ubiquitin FamilyE2|UEV|UEV
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF01040UbiAUbiA prenyltransferase familyFamilyInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF07691PA14PA14 domainDomainInterproscan
PF02731SKIP_SNWSKIP/SNW domainFamilyInterproscan
PF00179UQ_conUbiquitin-conjugating enzymeDomainInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF07647SAM_2SAM domain (Sterile alpha motif)DomainInterproscan
PF00264TyrosinaseCommon central domain of tyrosinaseDomainInterproscan
PF21296APAF-1-like_WHDApoptotic protease-activating factor 1-like, winged-helix domainDomainInterproscan
PF00619CARDCaspase recruitment domainDomainInterproscan
PF17908APAF1_CAPAF-1 helical domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00931NB-ARCNB-ARC domainDomainInterproscan
PF19745FUT8_N_catAlpha-(1,6)-fucosyltransferase N- and catalytic domainsDomainInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR026046FamilyUbiA prenyltransferase domain containing protein 1Interproscan
IPR000537FamilyUbiA prenyltransferase familyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR044878Homologous_superfamilyUbiA prenyltransferase superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR052387FamilyFibrocystin-related proteinInterproscan
IPR037524DomainPA14/GLEYA domainInterproscan
IPR011658DomainPA14 domainInterproscan
IPR004015DomainSKI-interacting protein SKIP, SNW domainInterproscan
IPR017862FamilySKI-interacting protein, SKIPInterproscan
IPR000608DomainUbiquitin-conjugating enzyme E2Interproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR050167FamilySerine/threonine-protein kinaseInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR008922Homologous_superfamilyDi-copper centre-containing domain superfamilyInterproscan
IPR002227DomainTyrosinase copper-binding domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR048975DomainApoptotic protease-activating factor 1, winged-helix domainInterproscan
IPR001315DomainCARD domainInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR041452DomainAPAF-1 helical domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR002182DomainNB-ARCInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR042197Homologous_superfamilyApoptotic protease-activating factors, helical domainInterproscan
IPR027350DomainGlycosyltransferase family 23 (GT23) domainInterproscan
IPR045573DomainAlpha-(1,6)-fucosyltransferase, N- and catalytic domainInterproscan
IPR024511FamilyWD repeat-containing and planar cell polarity effector protein FritzInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR139291,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASEInterproscan
PTHR46769POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1Interproscan
PTHR12096NUCLEAR PROTEIN SKIP-RELATEDInterproscan
PTHR24068UBIQUITIN-CONJUGATING ENZYME E2Interproscan
PTHR23257SERINE-THREONINE PROTEIN KINASEInterproscan
PTHR22845APOPTOTIC PROTEASE-ACTIVATING FACTOR 1Interproscan
PTHR13132ALPHA- 1,6 -FUCOSYLTRANSFERASEInterproscan
PTHR13667HOMOLOC-13Interproscan
PTHR45153TETRATRICOPEPTIDE REPEAT PROTEIN 16Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004659Molecular Functionprenyltransferase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0009234Biological Processmenaquinone biosynthetic processInterproscan
GO:0030173Cellular Componentobsolete integral component of Golgi membraneInterproscan
GO:0032194Biological Processubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoateInterproscan
GO:0042371Biological Processvitamin K biosynthetic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006301Biological Processpostreplication repairInterproscan
GO:0070534Biological Processprotein K63-linked ubiquitinationInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0043531Molecular FunctionADP bindingInterproscan
GO:0006487Biological Processprotein N-linked glycosylationInterproscan
GO:0036071Biological ProcessN-glycan fucosylationInterproscan
GO:0046921Molecular Functionalpha-(1->6)-fucosyltransferase activityInterproscan
GO:0007399Biological Processnervous system developmentInterproscan
GO:0044782Biological Processcilium organizationInterproscan
GO:0045184Biological Processestablishment of protein localizationInterproscan
GO:0097541Cellular Componentaxonemal basal plateInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06063SNW1, SKIIP, SKIP; SNW domain-containing protein 1-DNA repair and recombination proteinsko03400deepkoala
Protein kinasesko01001deepkoala
Platinum drug resistanceko01524deepkoala
Spliceosomeko03041deepkoala

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