Gene detail

Detailed information of g11090.t2 in Paracondylactis sinensis

Genomic Location: Chr_2:17378211...17386622
NR annotation: no NCBI-NR hit recorded
Species Paracondylactis sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

g11090.t2

GGAACGCCTGTTCTCTTCTCTTTGCTCAGGCTTTAGATCAAGTATCAGTATGTTCACACCATTTTATCGAAAAATTGTTCCTATCCAGGTGAAAACACTAAGAATGTGCAGCACATCAGCGTTAAGTAGACGTCTGGATGGTAAAGTAGCTGTGGTAACAGCATCTACTGAAGGTATTGGTCTTGCCATTGCACAACAGCTGGGGAGAGATGGTGCAAAAGTTGTTGTTAGTAGCCGCAAGCAAGACAATGTCATAAAAGCAACTGCTACCTTAGAAAATGAAGGAATTGATGTACTTGGTATCATGTGTCATGTTGGGAAATCTGAACACAGAAGGAATCTTGTCCAAAGGACACTGAGCCATTTTGGCAGCATTGATATCTTAGTCTCTAATGCAGCTGCAAATCCTGTGTTTGGTTCAGTTTTACAGACAACTGAGGAGGCCTGGGATAAGATTTTTGAAGTTAATGTTAAATCTGGTTTCCTCCTTGCCAAAGAGGTGGTTCCACACATGAATAAAAGAGGAGGGGGATCAATAGTATTCATTTCATCAATTGGAGGATACCAACCTCTACAGGGTCTAGGTGCATACTGTGTTAGTAAGACAGCATTATTTGGCCTGACTAAAGTGCTTGCTACAGAATGTGCTGATATGGGGATCAGAGTTAACTGTGTTGCCCCTGGTATCATAAAGACAAGGTTTAGTGCAGCACTCTGGAAAAATGAGGCAGTACATGAAGTAGTAGTCGAACGTATCCCTCAAAAAAGGTTGGGAAAGTCAGAGGAAGTAGGAGGAGCAGTTTCTTTCCTGTGTTCTGATCAAGCATCTTATTTAACAGGAGAAACTATTGTAATAGGTGGTGGGATGACAGCCAGGCTTTAGTACAGGCACAACAAACAACCCATTAGTCAGAACAAAATCAACTATCTTTGATCATTACAAATGTATTGTAGCAACAAATAATTAGGATCCTTTAAAATTGAATATGCTATAGTCAAGTTTTTAATAGTAATTGATATTAGTCCAGTAGTAGAAAGTTCCTCCTAGTCCCTATAAAAGTCAGACTATTAGCTGCACAATCCTGTGTCTTTGACATTTCTTTAGTGCCAAAATACAACTGTGGTAAGAAAACAGTGCTAAACACAGTACTACAGAAACTTTCATATGCATATCTTGTATTCATAAATAGTAACACTTTTACAAAAAAATGTAAAGAAAGTTGCAGCCATTTACAAAACATTAGAGCACAACTAGTTTTGGTGGACATTAAATTCCCATACATCCACAGATGTGTACTTGAATACTTCCTTTTAAAACTGTACATTATTGTAAAACATTCCTCATTGAAATAGACTTTTGATCCACATCTATCCACCATACCAAAGTTCAGCATTTAAATCCCTTGGTCCGGTTCAGTTATTCCCATTTTCTTAGCATATTTTTCTTAACTTTTTAAAGATTGAAACGAGTTGGGTGTTTCCAAATAATGACTAGTGCATAACCTTTCAAATCTTTGTTAATGAATGATGAAGTATTTGATGTATAGATGCTTCTAACTACCCCACCATGGTCCTCTTTCTCCCCCTCATCCTGACCTCATCCAACTTCTTGATAACATCATCTGCCTTCTTGGCCAGTTTCCTGTACTTGGTCAAAATTCTATTATTGAACAGTTCTTCAGTGTGTGGGTGGGTGCTAAGAAATGCACGTTCAAGGACGTACAAATCAACTCCCTTGTCTTCTGGAAGCGCAGACACCGAGCTAAGACCAAAATCGATCAAGATTATCTCCGTGTCCTTGCTTTGTTTTTCCAGGAGCATATTTGATGTGGTGAGATCGCCATGAATGCAGTCAACGTTGTGCATCAGTGCCAACGTCGATCCTATACAATCAGCAATATCATTCAACTTAGCCACCGCATCACCACAGTTCTCCTCTAAGAGACTATTTATACGATCCCTTAAAGTGTAACAATCTTGTATTCTCTCCATGAAGATTTGGTTCTTCTCGAAATCAATGAAGTACACACATGGTGTTCGGATTCCTGCCTTTCTGCATCTCAACAATGACCGTGCTTCTTGGGCCGTGCGACGGCATGTCAGCTTCTCGTCCAGCGAAGGATGCCTGTAGGATTTACTAAACCTCTCCTTGATAACAACAGGCTTGCCGTAAAATTCACCGGAAAATATCTTGGCCTCTGCTCCTTGTTTGATGAGAACACACTTTTCATTTTCGTCCGC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13561 all species →	adh_short_C2	Enoyl-(Acyl carrier protein) reductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002347 all species →	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR020904 all species →	Conserved_site	Short-chain dehydrogenase/reductase, conserved site	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43943 all species →	DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004090 all species →	Molecular Function	carbonyl reductase (NADPH) activity	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11147	DHRS4; dehydrogenase/reductase SDR family member 4	EC:1.1.-.-	Peroxisome	ko04146	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.