Detailed information of g111.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_067291345.1, TauD/TfdA family dioxygenase [Marinobacterium profundum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P80193Gamma-butyrobetaine dioxygenase OS=Pseudomonas sp. (strain AK-1) OX=29440 PE=1 SV=1
A0A4V8H042[2-(trimethylamino)ethyl]phosphonate dioxygenase OS=Leisingera caerulea OX=506591 GN=tmpA PE=1 SV=1
Q98KK0Probable gamma-butyrobetaine dioxygenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=mll1440 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01585G-patchG-patch domainFamilyInterproscan
PF17095CAMSAP_CC1Spectrin-binding region of Ca2+-CalmodulinFamilyInterproscan
PF07947YhhNYhhN familyFamilyInterproscan
PF00929RNase_TExonucleaseFamilyInterproscan
PF13808DDE_Tnp_1_assocDDE_Tnp_1-associatedDomainInterproscan
PF01609DDE_Tnp_1Transposase DDE domainDomainInterproscan
PF02668TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan
PF00999Na_H_ExchangerSodium/hydrogen exchanger familyFamilyInterproscan
PF00071RasRas familyDomainInterproscan
PF01926MMR_HSR150S ribosome-binding GTPaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR000467DomainG-patch domainInterproscan
IPR039146FamilyG patch domain and ankyrin repeat-containing protein 1Interproscan
IPR031372Conserved_siteCAMSAP, spectrin and Ca2+/calmodulin-binding regionInterproscan
IPR012506FamilyLysoplasmalogenase-likeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR022894FamilyOligoribonucleaseInterproscan
IPR013520DomainExonuclease, RNase T/DNA polymerase IIIInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR051698FamilyTransposase 11-likeInterproscan
IPR032806DomainH repeat-associated protein, N-terminalInterproscan
IPR002559DomainTransposase IS4-like domainInterproscan
IPR047647FamilyISAs1 transposaseInterproscan
IPR042098Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR050411FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan
IPR003819DomainTauD/TfdA-like domainInterproscan
IPR051843FamilyMonovalent cation:proton antiporter 1Interproscan
IPR006153DomainCation/H+ exchangerInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR020849FamilySmall GTPase, Ras-typeInterproscan
IPR019987FamilyGTP-binding protein, ribosome biogenesis, YsxCInterproscan
IPR006073DomainGTP binding domainInterproscan
IPR030393DomainEngB-type guanine nucleotide-binding (G) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20923BAT4 PROTEIN-RELATEDInterproscan
PTHR31885GH04784PInterproscan
PTHR30298H REPEAT-ASSOCIATED PREDICTED TRANSPOSASEInterproscan
PTHR10696GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan
PTHR31102-Interproscan
PTHR24070RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILYInterproscan
PTHR11649MSS1/TRME-RELATED GTP-BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005516Molecular Functioncalmodulin bindingInterproscan
GO:0030507Molecular Functionspectrin bindingInterproscan
GO:0031175Biological Processneuron projection developmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004803Molecular Functiontransposase activityInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0045329Biological Processcarnitine biosynthetic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0015672Biological Processinorganic cation transmembrane transportInterproscan
GO:0006812Biological Processmonoatomic cation transportInterproscan
GO:0015297Molecular Functionantiporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:1902600Biological Processproton transmembrane transportInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0019003Molecular FunctionGDP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13288orn, REX2, REXO2; oligoribonucleaseEC:3.1.-.-
GTP-binding proteinsko04031deepkoala
Chromosome and associated proteinsko03036deepkoala
Ether lipid metabolismko00565deepkoala
Ribosome biogenesisko03009deepkoala

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