Gene detail

Detailed information of g1114.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: CAH3014862.1, unnamed protein product [Porites evermanni]
Species abbreviation CCRUX · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9DG12	Aryl hydrocarbon receptor nuclear translocator 2 OS=Danio rerio OX=7955 GN=arnt2 PE=1 SV=2
O15945	Aryl hydrocarbon receptor nuclear translocator homolog OS=Drosophila melanogaster OX=7227 GN=tgo PE=1 SV=3
Q9BE97	Aryl hydrocarbon receptor nuclear translocator OS=Bos taurus OX=9913 GN=ARNT PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000612 (this species only)
Orthogroup (gene family)	OG0000849 (this species only)
Orthogroup (gene family)	OG0001412 (this species only)
Orthogroup (gene family)	OG0001443 (this species only)
Orthogroup (gene family)	OG0001592 (this species only)
Orthogroup (gene family)	OG0008312 (this species only)
Orthogroup (gene family)	OG0010823 (this species only)
Orthogroup (gene family)	OG0013096 (this species only)
Orthogroup (gene family)	OG0032570 (this species only)
Orthogroup (gene family)	OG0048298 (this species only)
Orthogroup (gene family)	OG0170711 (this species only)
Orthogroup (gene family)	OG0171342 (this species only)
Orthogroup (gene family)	OG0171864 (this species only)
Orthogroup (gene family)	OG0174446 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00989 all species →	PAS	PAS fold	Domain	Interproscan
PF00010 all species →	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan
PF14598 all species →	PAS_11	PAS domain	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF16656 all species →	Pur_ac_phosph_N	Purple acid Phosphatase, N-terminal domain	Domain	Interproscan
PF10192 all species →	GpcrRhopsn4	Rhodopsin-like GPCR transmembrane domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR001067 all species →	Family	Nuclear translocator	Interproscan
IPR000014 all species →	Domain	PAS domain	Interproscan
IPR011598 all species →	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR035965 all species →	Homologous_superfamily	PAS domain superfamily	Interproscan
IPR050933 all species →	Family	Circadian Clock Transcription Factors	Interproscan
IPR013767 all species →	Domain	PAS fold	Interproscan
IPR036638 all species →	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR050235 all species →	Family	Casein Kinase 1 Ser/Thr Protein Kinase	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR015914 all species →	Domain	Purple acid phosphatase, N-terminal	Interproscan
IPR029052 all species →	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR008963 all species →	Homologous_superfamily	Purple acid phosphatase-like, N-terminal	Interproscan
IPR047831 all species →	Family	GPR180/TMEM145	Interproscan
IPR019336 all species →	Domain	GPR180/TMEM145, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23511 all species →	SYNAPTIC VESICLE GLYCOPROTEIN 2	Interproscan
PTHR12242 all species →	UNCHARACTERIZED	Interproscan
PTHR23042 all species →	CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS	Interproscan
PTHR11909 all species →	CASEIN KINASE-RELATED	Interproscan
PTHR47326 all species →	TRANSPOSABLE ELEMENT TC3 TRANSPOSASE-LIKE PROTEIN	Interproscan
PTHR45778 all species →	PURPLE ACID PHOSPHATASE-RELATED	Interproscan
PTHR23252 all species →	INTIMAL THICKNESS RECEPTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005667 all species →	Cellular Component	transcription regulator complex	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0034751 all species →	Cellular Component	aryl hydrocarbon receptor complex	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0032436 all species →	Biological Process	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0090263 all species →	Biological Process	positive regulation of canonical Wnt signaling pathway	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0003993 all species →	Molecular Function	acid phosphatase activity	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0019236 all species →	Biological Process	response to pheromone	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07995	MMP15; matrix metalloproteinase-15 (membrane-inserted)	EC:3.4.24.-	Peptidases and inhibitors	ko01002	deepkoala
K08960	CSNK1E; casein kinase 1, epsilon	EC:2.7.11.1	Chromosome and associated proteins	ko03036	deepkoala
K09097	ARNT; aryl hydrocarbon receptor nuclear translocator	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.