Detailed information of g112.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_142902558.1, hypothetical protein [Exilibacterium tricleocarpae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5SPL2PHD finger protein 12 OS=Mus musculus OX=10090 GN=Phf12 PE=1 SV=1
Q96QT6PHD finger protein 12 OS=Homo sapiens OX=9606 GN=PHF12 PE=1 SV=2
Q04779Transcriptional regulatory protein RCO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RCO1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14238DUF4340Domain of unknown function (DUF4340)FamilyInterproscan
PF00171AldedhAldehyde dehydrogenase familyFamilyInterproscan
PF03133TTLTubulin-tyrosine ligase familyFamilyInterproscan
PF07687M20_dimerPeptidase dimerisation domainDomainInterproscan
PF00696AA_kinaseAmino acid kinase familyFamilyInterproscan
PF01546Peptidase_M20Peptidase family M20/M25/M40FamilyInterproscan
PF01490Aa_transTransmembrane amino acid transporter proteinFamilyInterproscan
PF00801PKDPKD domainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF16737PHF12_MRG_bdPHD finger protein 12 MRG binding domainDomainInterproscan
PF01822WSCWSC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025641DomainDomain of unknown function DUF4340Interproscan
IPR029510Conserved_siteAldehyde dehydrogenase, glutamic acid active siteInterproscan
IPR011408FamilyAldehyde dehydrogenaseInterproscan
IPR016163Homologous_superfamilyAldehyde dehydrogenase, C-terminalInterproscan
IPR015590DomainAldehyde dehydrogenase domainInterproscan
IPR016161Homologous_superfamilyAldehyde/histidinol dehydrogenaseInterproscan
IPR016162Homologous_superfamilyAldehyde dehydrogenase, N-terminalInterproscan
IPR051437FamilyTubulin tyrosine ligase-like monoglycylaseInterproscan
IPR004344FamilyTubulin-tyrosine ligase/Tubulin polyglutamylaseInterproscan
IPR026079FamilyCerebellar degeneration-related protein 2Interproscan
IPR004662FamilyAcetylglutamate kinase familyInterproscan
IPR036393Homologous_superfamilyAcetylglutamate kinase-like superfamilyInterproscan
IPR036264Homologous_superfamilyBacterial exopeptidase dimerisation domainInterproscan
IPR011650DomainPeptidase M20, dimerisation domainInterproscan
IPR001048DomainAspartate/glutamate/uridylate kinaseInterproscan
IPR001261Conserved_siteArgE/DapE/ACY1/CPG2/YscS, conserved siteInterproscan
IPR050072FamilyPeptidase M20A family, bacterial cell wall biosynthesisInterproscan
IPR002933FamilyPeptidase M20Interproscan
IPR013057DomainAmino acid transporter, transmembrane domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR000601DomainPKD domainInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR014010DomainREJ domainInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR038098Homologous_superfamilyPHD finger protein 12, MRG binding domain superfamilyInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR000253DomainForkhead-associated (FHA) domainInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR031966DomainPHD finger protein 12, MRG binding domainInterproscan
IPR046350Homologous_superfamilyCystatin superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11699ALDEHYDE DEHYDROGENASE-RELATEDInterproscan
PTHR45870TUBULIN MONOGLYCYLASE TTLL3Interproscan
PTHR19232CENTROCORTIN FAMILY MEMBERInterproscan
PTHR43808ACETYLORNITHINE DEACETYLASEInterproscan
PTHR46601ULP_PROTEASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR48017OS05G0424000 PROTEIN-RELATEDInterproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR46730POLYCYSTIN-1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0015630Cellular Componentmicrotubule cytoskeletonInterproscan
GO:0018094Biological Processprotein polyglycylationInterproscan
GO:0070736Molecular Functionprotein-glycine ligase activity, initiatingInterproscan
GO:0036211Biological Processprotein modification processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0003333Biological Processamino acid transmembrane transportInterproscan
GO:0015171Molecular Functionamino acid transmembrane transporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00128ALDH; aldehyde dehydrogenase (NAD+)EC:1.2.1.3
Axon guidanceko04360deepkoala
Transportersko02000deepkoala
Alcoholic liver diseaseko04936deepkoala

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