Detailed information of g1121.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_004208537.1, 40S ribosomal protein S15a [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6Q420Small ribosomal subunit protein uS8 OS=Danio rerio OX=7955 GN=rps15a PE=1 SV=1
Q76I82Small ribosomal subunit protein uS8 OS=Bos taurus OX=9913 GN=RPS15A PE=2 SV=1
P62244Small ribosomal subunit protein uS8 OS=Homo sapiens OX=9606 GN=RPS15A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00410Ribosomal_S8Ribosomal protein S8DomainInterproscan
PF10249NDUFB10NADH-ubiquinone oxidoreductase subunit 10FamilyInterproscan
PF09380FERM_CFERM C-terminal PH-like domainDomainInterproscan
PF08736FAFERM adjacent (FA)FamilyInterproscan
PF09379FERM_NFERM N-terminal domain DomainInterproscan
PF00373FERM_MFERM central domainDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF18039UBA_6UBA-like domainDomainInterproscan
PF11977RNase_Zc3h12aZc3h12a-like Ribonuclease NYN domainDomainInterproscan
PF02867Ribonuc_red_lgCRibonucleotide reductase, barrel domainFamilyInterproscan
PF03477ATP-coneATP cone domainDomainInterproscan
PF00317Ribonuc_red_lgNRibonucleotide reductase, all-alpha domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047863Conserved_siteSmall ribosomal subunit protein uS8, conserved siteInterproscan
IPR035987Homologous_superfamilySmall ribosomal subunit protein uS8 superfamilyInterproscan
IPR000630FamilySmall ribosomal subunit protein uS8Interproscan
IPR019377FamilyNADH-ubiquinone oxidoreductase, subunit 10Interproscan
IPR039993FamilyNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10Interproscan
IPR019749DomainBand 4.1 domainInterproscan
IPR018980DomainFERM, C-terminal PH-like domainInterproscan
IPR019747Conserved_siteFERM conserved siteInterproscan
IPR019748DomainFERM central domainInterproscan
IPR014847DomainFERM adjacentInterproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR035963Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR018979DomainFERM, N-terminalInterproscan
IPR000299DomainFERM domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR040546DomainRege-1, UBA-like domainInterproscan
IPR021869DomainRibonuclease Zc3h12a-like, NYN domainInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR051101FamilyZC3H12/N4BP1 Ribonuclease and RegulatorInterproscan
IPR000788DomainRibonucleotide reductase large subunit, C-terminalInterproscan
IPR005144DomainATP-cone domainInterproscan
IPR013346DomainRibonucleotide reductase, class I, alpha subunit, C-terminalInterproscan
IPR039718FamilyRibonucleoside-diphosphate reductase large subunitInterproscan
IPR008926Homologous_superfamilyRibonucleotide reductase R1 subunit, N-terminalInterproscan
IPR013509DomainRibonucleotide reductase large subunit, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR050079FamilyDEAD box RNA helicaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR1175840S RIBOSOMAL PROTEIN S15AInterproscan
PTHR13094NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNITInterproscan
PTHR232804.1 G PROTEINInterproscan
PTHR23080THAP DOMAIN PROTEINInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR12876N4BP1-RELATEDInterproscan
PTHR11573RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAINInterproscan
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:0005747Cellular Componentobsolete mitochondrial respiratory chain complex IInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0036464Cellular Componentcytoplasmic ribonucleoprotein granuleInterproscan
GO:0090502Biological Processobsolete RNA phosphodiester bond hydrolysis, endonucleolyticInterproscan
GO:0004748Molecular Functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptorInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005971Cellular Componentribonucleoside-diphosphate reductase complexInterproscan
GO:0009263Biological Processdeoxyribonucleotide biosynthetic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14805DDX24, MAK5; ATP-dependent RNA helicase DDX24/MAK5EC:5.6.2.7
Ribosomeko03011deepkoala
DNA repair and recombination proteinsko03400deepkoala
Messenger RNA biogenesisko03019deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala
Ribosome biogenesisko03009deepkoala

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