Detailed information of g11228.t1 in Acropora digitifera

Genomic Location: chr5Alt:16009901...16052523
NR annotation: XP_044167271.1, plexin A3-like isoform X4 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B0S5N4Plexin A3 OS=Danio rerio OX=7955 GN=plxna3 PE=2 SV=2
P70206Plexin-A1 OS=Mus musculus OX=10090 GN=Plxna1 PE=1 SV=1
Q9UIW2Plexin-A1 OS=Homo sapiens OX=9606 GN=PLXNA1 PE=1 SV=3
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20170
all species →		Plexin_RBDPlexin cytoplasmic RhoGTPase-binding domainDomainInterproscan
PF18020
all species →		TIG_2TIG domain found in plexinDomainInterproscan
PF01833
all species →		TIGIPT/TIG domainDomainInterproscan
PF08337
all species →		Plexin_cytoplPlexin cytoplasmic RasGAP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR046800
all species →		DomainPlexin, cytoplasmic RhoGTPase-binding domainInterproscan
IPR041362
all species →		DomainPlexin, TIG domain 2Interproscan
IPR002909
all species →		DomainIPT domainInterproscan
IPR013548
all species →		DomainPlexin, cytoplasmic RasGAP domainInterproscan
IPR014756
all species →		Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR031148
all species →		FamilyPlexin familyInterproscan
IPR008936
all species →		Homologous_superfamilyRho GTPase activation proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22625
all species →		PLEXINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0017154
all species →		Molecular Functionsemaphorin receptor activityInterproscan
GO:0002116
all species →		Cellular Componentsemaphorin receptor complexInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0030334
all species →		Biological Processregulation of cell migrationInterproscan
GO:0071526
all species →		Biological Processsemaphorin-plexin signaling pathwayInterproscan
GO:1902287
all species →		Biological Processsemaphorin-plexin signaling pathway involved in axon guidanceInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g11228.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP