Detailed information of g11264.t1 in Montipora capitata

Genomic Location: Sc0000332:335577...340863
NR annotation: XP_020625116.1, pre-mRNA-splicing factor SYF1-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9HCS7Pre-mRNA-splicing factor SYF1 OS=Homo sapiens OX=9606 GN=XAB2 PE=1 SV=2
Q9DCD2Pre-mRNA-splicing factor SYF1 OS=Mus musculus OX=10090 GN=Xab2 PE=1 SV=1
Q99PK0Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus OX=10116 GN=Xab2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR045075FamilyPre-mRNA-splicing factor Syf1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11246PRE-MRNA SPLICING FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000349Biological Processgeneration of catalytic spliceosome for first transesterification stepInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974Cellular ComponentPrp19 complexInterproscan
GO:0071007Cellular ComponentU2-type catalytic step 2 spliceosomeInterproscan
GO:0071014Cellular Componentpost-mRNA release spliceosomal complexInterproscan

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