Gene detail

Detailed information of g11268.t2 in Tripedalia maipoensis

Genomic Location: scaffold_8:23822486...23882150
NR annotation: no NCBI-NR hit recorded
Species abbreviation TMAIP · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g11268.t2

ATGGCATGCTTTGAGGTGTTCGGGCTTGTAAGCCCATCAGTCACCCTCGGAAAACCGGGCTGTAAGATAGTCGTGGAGGAGAATACCCTTACATGTACCTGGGAAAGAGCTGGGGAGACTAGTGTCAGCTTCAAGAAACTTTTTTCCTTAGGAATTCAGAATGAAGATGCATTTAAATTTGCAGTGGAAAAATTGATTCACGAATGCCTGCTAGGGTTCAATGTATCGCTAGCTCTACTTAGTTCAACTAAATTTTCCCTTTATCCTTTACTCTTTGGACCGACAGGATTGACTTTTCCTTTTCCAAATAAAAATGACAGCTTGATTGCACGCTCTGTTGGGTTTCTATTTCGTGAAATTGGTAATCTGAATCATGGTGTTTCTGCCAAGAATGTGAGAGCCAAGACACAACTACCAAGAGCAACGATAACCTCTGTGAGTGAGCATAATACAAAAGTATGTGTTAAATGCTACGAGGTGCACGAAAATCATTTAGTGGACTTGCTAGAAAATTCCATGGAAGCTTTGGAGACGTACAGAAGAGAAACCCCAGCTGCCATGAATCCAAGTGACCCAGAGCAGAGTCTAACAAGTTCCCTTGAAGTTGGAGATGCAATAACTTGTCTTAAAGTTATTCAAGCTGCCTTAAATGGAAGGAGAGCTGATGAACTGCAAAACTCAGAAGTAACATTGGTGATTGAATTAGTACTCTTTCGTGCATCTCCACATGCAACCAATGCTTACCAGAGCTGTTTTAGGATAACATTGCTTCCAAGTCTTGAGGTTATACCTTTGGAAGCCACAGGAATCTCATCAAGTACCACAGCTGTGAATAATAAAGGGCTGAAATGTTTGAGTCAAGTTCTCTGCTGCTGGCCAAGTAACCCCAGTAAATCCATGACTCTGTACAGAGAATCTTACTTGACTGCAAGTTTAAAAGATACTTTTGGCGGAAACGGATTCACGTCCTTTATCATAGGGCTAGAAGCAAACGATATGGAAATTATGACTCGGGTCAAGTTTTTCCTAAAATTACTATCGAAGATCAGGAATGTTCCTATTGTTAACACCAAAAATGCAATTCTCCTCATCGAACGGTATGATCGCACTTTGCGAGACCTCATGGAAATGAATAAGCAGTTAAGGGAAGGCACACCCCAGGTCCTTCATGCTGGAAGTGAAGAGATCGCAAGGCTGCAAAAAGATCTTCGTCAGTTAAATGAAGAAAAGGTTAGTCCTGTTGGCGAAAATGCTGCTTTGAAGGAAGAATTGTTGGCAATGAGAATGAAATTCACGCAGCAAGTTGAGTCCAAGACTCTTTTGTCATCGAGAATGGTTGACTCCGAGCAGGAAAAGTTGAAGATGTCTCATACAACAGTAGAGCTCCAGTTGGAAAACAACAGACTGAAGCAAGATACAGAAAGACTGCTATATGAATTGAAGAGCAAGAACTCAGTCTTGCAAAGCCAAATTGAAAGCCTGGAACGTCATCTAGCTATAGAAAAGCGGAAATCACTGGAGCTGCACGAGGAAGTCCAATACCTCGAAAAGGAACACAAAGACTTGACTAACGAATATGTCAACATCAAACACAACCATTCCATGTTGACTAACGAATATGATAGGCAGGTGAAGCAAAGAGACAGCTTGGCGAAGGAATTAGAGGATCTGATGAGTTCTAAAGAAGAGCTTCTAATGGGCCGCGATTACCAAGAGATGTCTGCGCTACAACGTTTTCGTGACAATTTAAAGAAAATCGCAAAGAAAGCGGATAAAGATGCAAGCCAGGCACAGGCTTCTGGAAGTGCTAGCCAGCGAAGTTGGACAGCCGCGGAACTAAAGAAGCAGCTTCTACGTAATCATCAGGATCGAACCGAAAAGCTTGAAAACCTCCGGCTGATGCATGACAAGGAGTTGAAGGATTTTGAAAAAAAAATGGATGAAGTTACTGAGAAATTGACTTCTTCGGAGGCCCTCAGTCACCGTTACAAGCTAAAGATTGCTGAACAGAATGGCGTTTGCATCGTGCTTGGCGACAAGGTATCTTACCTGGAGACGGTATGCAAAGCGCAGAGTGATAAGATCAATCACATATCCCATGCATACACCCAGCGATTGCAAGAATACATATGTAACCTTAAGGAGTATGTGACGTTACAAGACAATCAAGCTCGTCATAAGGAGAGTACAGCAGCATTACTCGACCAGATGTTAGATGACTTCAAAACCTGCTACCAGAGCCGAATGGAGGAACTGACGTCTCGCCACGAGAGACTCCTGTCCCATGCCCAGGAGATCTACAAAAGTAAAGAAGCTATCCTAGCAGCGTACAAGATGGCCCTTTGGAAGTTGGATGCAAAGGAATCACAGGACTTTGATATAAACAATTTGGATGTTCCCTTACCTACAGATGCAGAGATCGAAATGCAACATGCCAAAGAAAGGAACGATTTGCAGTCGCAGCTTATTCTTGCAGAAGAAAATTTGAGTGAATTTCAGGTGAAGGTAGACCATCTCAAGAAACAGATCGCCGTGAAAGATGAAAGAATCAGTGACCTCGTTAAAGGCAGTGGCAACAACGCTGTGGTAAATCACTCTGAGAATAGCGTTAGCATGCATATGATGCAAAGGGAGCTGAGAGAGTTTACTCTGAATACACAGCTGTCTTTAGAGAAGGAGCGCGCAGACCTATTGACCCGATGCCAATTGTCTGAACAGCAGTTATTGGAATGCCAGGCTTTCATTGATACCTACATTAAAAGATATCAGCAAGAAATTGTATACTTAAGAAGATTGGTTCAAGGAAATAGCTATGTAGATCATGCTCTAATAGCACAACCGCTGAACACAGAACAGAGAGCTATTCTTCCCCCTTTGGATCGGACGAAAGACAGGCGATACCACCAATGA

Transcript

g11268.t2

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14739 all species →	DUF4472	Domain of unknown function (DUF4472)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR029329 all species →	Domain	Domain of unknown function DUF4472	Interproscan
IPR039873 all species →	Family	Coiled-coil domain-containing protein 78	Interproscan
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22106 all species →	COILED-COIL DOMAIN-CONTAINING PROTEIN 78	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23693	CCDC78; coiled-coil domain-containing protein 78	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.