Gene detail

Detailed information of g11277.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: XP_002166312.1, probable splicing factor, arginine/serine-rich 6 isoform X3 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q02427	RNA-binding protein 1 OS=Drosophila melanogaster OX=7227 GN=Rbp1 PE=1 SV=3
Q18409	Probable splicing factor, arginine/serine-rich 6 OS=Caenorhabditis elegans OX=6239 GN=rsp-6 PE=3 SV=1
Q3T106	Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48038	RIBONUCLEOPROTEIN RB97D	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12896	SRSF7, SFRS7; serine/arginine-rich splicing factor 7	-	Spliceosome	ko03041	deepkoala