Detailed information of g113.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBV6644521.1, SRPBCC family protein [Cyclobacteriaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q60700Mitogen-activated protein kinase kinase kinase 12 OS=Mus musculus OX=10090 GN=Map3k12 PE=1 SV=1
Q12852Mitogen-activated protein kinase kinase kinase 12 OS=Homo sapiens OX=9606 GN=MAP3K12 PE=1 SV=2
Q63796Mitogen-activated protein kinase kinase kinase 12 OS=Rattus norvegicus OX=10116 GN=Map3k12 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09822ABC_transp_auxABC-type uncharacterized transport systemFamilyInterproscan
PF00654Voltage_CLCVoltage gated chloride channelFamilyInterproscan
PF20258tRNA_Me_trans_CAminomethyltransferase beta-barrel domainDomainInterproscan
PF03054tRNA_Me_transtRNA methyl transferase HUP domainDomainInterproscan
PF20259tRNA_Me_trans_MtRNA methyl transferase PRC-barrel domainDomainInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF15057DUF4537Domain of unknown function (DUF4537)DomainInterproscan
PF13768VWA_3von Willebrand factor type A domainDomainInterproscan
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00335TetraspaninTetraspanin familyFamilyInterproscan
PF04824Rad21_Rec8Conserved region of Rad21 / Rec8 like proteinFamilyInterproscan
PF03645Tctex-1Tctex-1 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019196DomainABC-type uncharacterised transport systemInterproscan
IPR001807FamilyChloride channel, voltage gatedInterproscan
IPR014743Homologous_superfamilyChloride channel, coreInterproscan
IPR051280FamilyVoltage-gated chloride channel/antiporterInterproscan
IPR023382Homologous_superfamilytRNA-specific 2-thiouridylase MnmA-like, central domain superfamilyInterproscan
IPR004506FamilytRNA-specific 2-thiouridylaseInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR046885DomaintRNA-specific 2-thiouridylase MnmA-like, C-terminal domainInterproscan
IPR046884DomaintRNA-specific 2-thiouridylase MnmA-like, central domainInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR032770DomainDomain of unknown function DUF4537Interproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR050167FamilySerine/threonine-protein kinaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR044574FamilyATPase ARIP4-likeInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR018499FamilyTetraspanin/PeripherinInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR039781FamilyRad21/Rec8-like proteinInterproscan
IPR023093Homologous_superfamilyScpA-like, C-terminalInterproscan
IPR006909DomainRad21/Rec8-like protein, C-terminal, eukaryoticInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR005334FamilyDynein light chain Tctex-1 likeInterproscan
IPR038586Homologous_superfamilyTctex-1-like superfamilyInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11689CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBERInterproscan
PTHR11933TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASEInterproscan
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR14343VWFA DOMAIN-CONTAINING PROTEINInterproscan
PTHR23257SERINE-THREONINE PROTEIN KINASEInterproscan
PTHR45797RAD54-LIKEInterproscan
PTHR12585SCC1 / RAD21 FAMILY MEMBERInterproscan
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005247Molecular Functionvoltage-gated chloride channel activityInterproscan
GO:0006821Biological Processchloride transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0015108Molecular Functionchloride transmembrane transporter activityInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0016783Molecular Functionsulfurtransferase activityInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0002143Biological ProcesstRNA wobble position uridine thiolationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030018Cellular ComponentZ discInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0055001Biological Processmuscle cell developmentInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0007062Biological Processsister chromatid cohesionInterproscan
GO:0008278Cellular Componentcohesin complexInterproscan
GO:1990414Biological Processreplication-born double-strand break repair via sister chromatid exchangeInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02032ddpF; peptide/nickel transport system ATP-binding protein-Protein kinasesko01001deepkoala
Ion channelsko04040deepkoala
Cytoskeleton proteinsko04812deepkoala
Transfer RNA biogenesisko03016deepkoala
Transportersko02000deepkoala

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