Detailed information of g1134.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_001624055.1, Golgi SNAP receptor complex member 1 isoform X1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q2TBU3Golgi SNAP receptor complex member 1 OS=Bos taurus OX=9913 GN=GOSR1 PE=2 SV=1
O95249Golgi SNAP receptor complex member 1 OS=Homo sapiens OX=9606 GN=GOSR1 PE=1 SV=1
Q5RBL6Golgi SNAP receptor complex member 1 OS=Pongo abelii OX=9601 GN=GOSR1 PE=2 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF21549PRDM2_PRPR domain zinc finger protein 2, PR domainDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF02463SMC_NRecF/RecN/SMC N terminal domainDomainInterproscan
PF12352V-SNARE_CSnare region anchored in the vesicle membrane C-terminusDomainInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF17832Pre-PUAPre-PUA-like domainDomainInterproscan
PF10589NADH_4Fe-4SNADH-ubiquinone oxidoreductase-F iron-sulfur binding regionDomainInterproscan
PF01512Complex1_51KRespiratory-chain NADH dehydrogenase 51 Kd subunitFamilyInterproscan
PF012572Fe-2S_thioredxThioredoxin-like [2Fe-2S] ferredoxinFamilyInterproscan
PF00550PP-bindingPhosphopantetheine attachment siteDomainInterproscan
PF07993NAD_binding_4Male sterility proteinFamilyInterproscan
PF00106adh_shortshort chain dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR001214DomainSET domainInterproscan
IPR050331FamilyZinc fingerInterproscan
IPR044417DomainPRDM7/PRDM9, PR/SET domainInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003395DomainRecF/RecN/SMC, N-terminalInterproscan
IPR023601FamilyGolgi SNAP receptor complex, subunit 1Interproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR036885Homologous_superfamilySWIB/MDM2 domain superfamilyInterproscan
IPR003121DomainSWIB/MDM2 domainInterproscan
IPR041366DomainPre-PUA domainInterproscan
IPR039757FamilyEukaryotic translation initiation factor 2DInterproscan
IPR048248DomainEukaryotic translation initiation factor 2D-like, PUA RNA-binding domainInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR048247DomainEukaryotic translation initiation factor 2D, N-terminal domainInterproscan
IPR037207Homologous_superfamilyNADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilyInterproscan
IPR019575DomainNADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainInterproscan
IPR037225Homologous_superfamilyNADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyInterproscan
IPR001949Conserved_siteNADH:ubiquinone oxidoreductase, 51kDa subunit, conserved siteInterproscan
IPR041921Homologous_superfamilyNADH-quinone oxidoreductase subunit E, N-terminalInterproscan
IPR011538DomainNADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR006162PTMPhosphopantetheine attachment siteInterproscan
IPR020904Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR009081DomainPhosphopantetheine binding ACP domainInterproscan
IPR013120DomainFatty acyl-coenzyme A reductase, NAD-binding domainInterproscan
IPR010080DomainThioester reductase-like domainInterproscan
IPR036736Homologous_superfamilyACP-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR16515PR DOMAIN ZINC FINGER PROTEINInterproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan
PTHR32158RING-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR18937STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBERInterproscan
PTHR21094GOS-28 SNARE- RELATEDInterproscan
PTHR19303TRANSPOSONInterproscan
PTHR12217EUKARYOTIC TRANSLATION INITIATION FACTOR 2DInterproscan
PTHR43578NADH-QUINONE OXIDOREDUCTASE SUBUNIT FInterproscan
PTHR44845CARRIER DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0042054Molecular Functionhistone methyltransferase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000799Cellular Componentcondensin complexInterproscan
GO:0007076Biological Processmitotic chromosome condensationInterproscan
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0005801Cellular Componentcis-Golgi networkInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005484Molecular FunctionSNAP receptor activityInterproscan
GO:0005797Cellular ComponentGolgi medial cisternaInterproscan
GO:0006906Biological Processvesicle fusionInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0001731Biological Processformation of translation preinitiation complexInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0051539Molecular Function4 iron, 4 sulfur cluster bindingInterproscan
GO:0008137Molecular FunctionNADH dehydrogenase (ubiquinone) activityInterproscan
GO:0010181Molecular FunctionFMN bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20796PRDM7_9; [histone H3]-lysine4 N-trimethyltransferase PRDM7/9EC:2.1.1.354
Membrane traffickingko04131deepkoala
Oxidative phosphorylationko00190deepkoala
Chromosome and associated proteinsko03036deepkoala

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