Detailed information of g11349.t1.1 in Nemopilema nomurai

Genomic Location: :...
NR annotation: CAB3981774.1, Hypothetical predicted protein [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1R3W0TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Danio rerio OX=7955 GN=taf1b PE=2 SV=1
Q9VH20TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Drosophila melanogaster OX=7227 GN=TAF1B PE=1 SV=1
Q5ZJR9TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Gallus gallus OX=9031 GN=TAF1B PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20645Rrn7_cyclin_CRrn7/TAF1B, C-terminal cyclin domainDomainInterproscan
PF20644Rrn7_cyclin_NRrn7/TAF1B, N-terminal cyclin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048538DomainRrn7/TAF1B, C-terminal cyclin domainInterproscan
IPR048540DomainRrn7/TAF1B, N-terminal cyclin domainInterproscan
IPR033599FamilyRNA polymerase I transcription initiation factor TAF1B/Rrn7Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31576TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001164Molecular FunctionRNA polymerase I core promoter sequence-specific DNA bindingInterproscan
GO:0001188Biological ProcessRNA polymerase I preinitiation complex assemblyInterproscan
GO:0005668Cellular ComponentRNA polymerase transcription factor SL1 complexInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan
GO:0042790Biological Processnucleolar large rRNA transcription by RNA polymerase IInterproscan
GO:0070860Cellular ComponentRNA polymerase I core factor complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15213TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B-Transcription machineryko03021deepkoala

TOP