Detailed information of g1135.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_048582113.1, protein HIRA isoform X1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P79987Protein HIRA OS=Gallus gallus OX=9031 GN=HIRA PE=1 SV=2
Q8QFR2Protein HIRA OS=Xenopus laevis OX=8355 GN=hira PE=1 SV=2
O42611Protein HIRA OS=Takifugu rubripes OX=31033 GN=hira PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00753Lactamase_BMetallo-beta-lactamase superfamilyDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF13442Cytochrome_CBB3Cytochrome C oxidase, cbb3-type, subunit III DomainInterproscan
PF07569HiraTUP1-like enhancer of splitFamilyInterproscan
PF09453HIRA_BHIRA B motifMotifInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF05667CCDC22_CCCCDC22 protein coiled-coil regionCoiled-coilInterproscan
PF11894Nup192Nuclear pore complex scaffold, nucleoporins 186/192/205RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044528DomainPersulfide dioxygenase-like, MBL-fold metallo-hydrolase domainInterproscan
IPR036866Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR001279DomainMetallo-beta-lactamaseInterproscan
IPR051682FamilyMitochondrial Persulfide DioxygenaseInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR009056DomainCytochrome c-like domainInterproscan
IPR036909Homologous_superfamilyCytochrome c-like domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR031120FamilyWD repeat HIR1-likeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR011494DomainProtein HIRA-like, C-terminalInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019015Conserved_siteHIRA B motifInterproscan
IPR048348DomainCCDC22, coiled-coil domainInterproscan
IPR008530FamilyCoiled-coil domain-containing protein 22Interproscan
IPR029359FamilyFAM181Interproscan
IPR021827FamilyNucleoporin Nup186/Nup192/Nup205Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43084PERSULFIDE DIOXYGENASE ETHE1Interproscan
PTHR10492UNCHARACTERIZEDInterproscan
PTHR19303TRANSPOSONInterproscan
PTHR40394LIPOPROTEIN-RELATEDInterproscan
PTHR13831MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINSInterproscan
PTHR15668JM1 PROTEINInterproscan
PTHR33766PROTEIN FAM181BInterproscan
PTHR31344NUCLEAR PORE COMPLEX PROTEIN NUP205Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006749Biological Processglutathione metabolic processInterproscan
GO:0050313Molecular Functionsulfur dioxygenase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0070813Biological Processhydrogen sulfide metabolic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0009055Molecular Functionelectron transfer activityInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0000417Cellular ComponentHIR complexInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0006325Biological Processchromatin organizationInterproscan
GO:0006336Biological Processchromatin organizationInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0097602Molecular Functioncullin family protein bindingInterproscan
GO:2000060Biological Processpositive regulation of ubiquitin-dependent protein catabolic processInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006999Biological Processnuclear pore organizationInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0044611Cellular Componentnuclear pore inner ringInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11293HIRA, HIR1; protein HIRA/HIR1-Chromosome and associated proteinsko03036deepkoala

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