Detailed information of g1138.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020899701.1, SAGA-associated factor 29 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q96ES7SAGA-associated factor 29 OS=Homo sapiens OX=9606 GN=SGF29 PE=1 SV=1
P0C606SAGA-associated factor 29 OS=Rattus norvegicus OX=10116 GN=Sgf29 PE=1 SV=1
Q9DA08SAGA-associated factor 29 OS=Mus musculus OX=10090 GN=Sgf29 PE=1 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF04389Peptidase_M28Peptidase family M28FamilyInterproscan
PF00452Bcl-2Apoptosis regulator proteins, Bcl-2 familyFamilyInterproscan
PF03133TTLTubulin-tyrosine ligase familyFamilyInterproscan
PF07039SGF29_TudorSGF29 tudor-like domainDomainInterproscan
PF02668TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan
PF02811PHPPHP domainFamilyInterproscan
PF17657DNA_pol3_fingerBacterial DNA polymerase III alpha subunit finger domainDomainInterproscan
PF14579HHH_6Helix-hairpin-helix motifDomainInterproscan
PF07733DNA_pol3_alphaBacterial DNA polymerase III alpha NTPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR043359FamilyC2H2-type zinc-finger protein GLI-likeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR039866FamilyCarboxypeptidase QInterproscan
IPR007484DomainPeptidase M28Interproscan
IPR026298FamilyBcl-2 familyInterproscan
IPR036834Homologous_superfamilyBcl-2-like superfamilyInterproscan
IPR046371DomainBcl-2, Bcl-2 homology region 1-3Interproscan
IPR002475FamilyBcl2-likeInterproscan
IPR004344FamilyTubulin-tyrosine ligase/Tubulin polyglutamylaseInterproscan
IPR010750DomainSGF29 tudor-like domainInterproscan
IPR047288DomainSAGA-associated factor 29, first Tudor domainInterproscan
IPR037802FamilySAGA-associated factor 29Interproscan
IPR047287DomainSAGA-associated factor 29, second Tudor domainInterproscan
IPR042098Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR003819DomainTauD/TfdA-like domainInterproscan
IPR050411FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR004013DomainPHP domainInterproscan
IPR004805FamilyError-prone DNA polymerase/DNA polymerase III subunit alpha DnaE/PolCInterproscan
IPR016195Homologous_superfamilyPolymerase/histidinol phosphatase-likeInterproscan
IPR040982DomainDNA polymerase III alpha subunit finger domainInterproscan
IPR029460DomainDNA polymerase, helix-hairpin-helix motifInterproscan
IPR041931Homologous_superfamilyBacterial DNA polymerase III alpha subunit, thumb domainInterproscan
IPR011708DomainBacterial DNA polymerase III, alpha subunit, NTPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45718TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUSInterproscan
PTHR12053PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATEDInterproscan
PTHR11256BCL-2 RELATEDInterproscan
PTHR12241TUBULIN POLYGLUTAMYLASEInterproscan
PTHR21539UNCHARACTERIZEDInterproscan
PTHR10696GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR32294DNA POLYMERASE III SUBUNIT ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0043171Biological Processpeptide catabolic processInterproscan
GO:0070573Molecular Functionmetallodipeptidase activityInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0005741Cellular Componentmitochondrial outer membraneInterproscan
GO:0008630Biological Processintrinsic apoptotic signaling pathway in response to DNA damageInterproscan
GO:0042803Molecular Functionprotein homodimerization activityInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0097192Biological Processextrinsic apoptotic signaling pathway in absence of ligandInterproscan
GO:0036211Biological Processprotein modification processInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0015631Molecular Functiontubulin bindingInterproscan
GO:0018095Biological Processprotein polyglutamylationInterproscan
GO:0070740Molecular Functiontubulin-glutamic acid ligase activityInterproscan
GO:0000124Cellular ComponentSAGA complexInterproscan
GO:0035064Molecular Functionmethylated histone bindingInterproscan
GO:0043966Biological Processobsolete histone H3 acetylationInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0008408Molecular Function3'-5' exonuclease activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02163BCLW; apoptosis regulator BCL-W-Chromosome and associated proteinsko03036deepkoala
DNA repair and recombination proteinsko03400deepkoala
Peptidases and inhibitorsko01002deepkoala
Transportersko02000deepkoala

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