Detailed information of g1140.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_029191075.1, retinoblastoma-like protein 1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P28749Retinoblastoma-like protein 1 OS=Homo sapiens OX=9606 GN=RBL1 PE=1 SV=3
Q64701Retinoblastoma-like protein 1 OS=Mus musculus OX=10090 GN=Rbl1 PE=1 SV=3
D3ZS28Retinoblastoma-like protein 1 OS=Rattus norvegicus OX=10116 GN=Rbl1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF01553AcyltransferaseAcyltransferaseFamilyInterproscan
PF00644PARPPoly(ADP-ribose) polymerase catalytic domainFamilyInterproscan
PF06237SLC52_ribofla_trSolute carrier family 52, riboflavin transporterFamilyInterproscan
PF01857RB_BRetinoblastoma-associated protein B domainDomainInterproscan
PF01858RB_ARetinoblastoma-associated protein A domainDomainInterproscan
PF11934DUF3452Domain of unknown function (DUF3452)FamilyInterproscan
PF15067FAM124FAM124 domainDomainInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR002123DomainPhospholipid/glycerol acyltransferaseInterproscan
IPR012317DomainPoly(ADP-ribose) polymerase, catalytic domainInterproscan
IPR050800FamilyADP-ribosyltransferase diphtheria toxin-likeInterproscan
IPR009357FamilySolute carrier family 52, riboflavin transporterInterproscan
IPR002719DomainRetinoblastoma-associated protein, B-boxInterproscan
IPR028309FamilyRetinoblastoma protein familyInterproscan
IPR036915Homologous_superfamilyCyclin-like superfamilyInterproscan
IPR002720DomainRetinoblastoma-associated protein, A-boxInterproscan
IPR015030DomainRetinoblastoma-associated protein, C-terminalInterproscan
IPR024599DomainRetinoblastoma-associated protein, N-terminalInterproscan
IPR046365DomainFAM124 domainInterproscan
IPR029068Homologous_superfamilyGlyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseInterproscan
IPR029380FamilyFAM124Interproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR039477DomainILEI/PANDER domainInterproscan
IPR052252FamilyHyaluronic acid metabolism regulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR33244INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR242475-HYDROXYTRYPTAMINE RECEPTORInterproscan
PTHR23063PHOSPHOLIPID ACYLTRANSFERASEInterproscan
PTHR10459DNA LIGASEInterproscan
PTHR12929SOLUTE CARRIER FAMILY 52Interproscan
PTHR13742RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATEDInterproscan
PTHR14715FAM124 DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR19303TRANSPOSONInterproscan
PTHR15535TRANSMEMBRANE PROTEIN 2-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0007508Biological Processlarval heart developmentInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0061343Biological Processcell adhesion involved in heart morphogenesisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0004993Molecular FunctionG protein-coupled serotonin receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007187Biological ProcessG protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messengerInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030425Cellular ComponentdendriteInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0042171Molecular Functionlysophosphatidic acid acyltransferase activityInterproscan
GO:0003950Molecular FunctionNAD+-protein poly-ADP-ribosyltransferase activityInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0070212Biological Processprotein poly-ADP-ribosylationInterproscan
GO:1990404Molecular FunctionNAD+-protein ADP-ribosyltransferase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0032217Molecular Functionriboflavin transmembrane transporter activityInterproscan
GO:0032218Biological Processriboflavin transportInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0051726Biological Processregulation of cell cycleInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:2000134Biological Processnegative regulation of G1/S transition of mitotic cell cycleInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12062trbI; conjugal transfer pilin signal peptidase TrbI-Protein phosphatases and associated proteinsko01009deepkoala
Transcription factorsko03000deepkoala
Secretion systemko02044deepkoala

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